Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3498 ATGGAAGATTTAGGTGGTACCCGATTCGATGGCCTTAGTAATGCTGCAAGGAAGAAGCGGAGTCAAACTTCTCGCCGGCCTCGACCTGATTCACAGCCTGTTTCTGATGGGCCATCTCCTTTGTCATCAACACCTTCAGATGATGCAGGCAAGGCCTCTAGTGATGAGAATGCTGGTTGCAATGCTAATCCCAAGAGAAAAGAATTTAATCTTAACCATTATGTCTCTAGTGTCTCCTCTGCCACCACAGTTGAAGATGGTAAATCCCATAAAAAGAGTAAAATGGATGGAGAATTCCATGTGTATTATAATAATGAGCCTGGACATGTTTCATATAATAAACGCTGTAGTGAGGGTGTCCTTGCTCCTGCTAATTGGAAAGGCTCTAGCAAATCAAAAGATATTTCGGAAGTGGAATCAAGAAGTGCAGATGTGTATGCTGGAAGGAATTTCGAAGGTATGAGCTTGGGGCAGTCAGGAGTTCCTCTGGATGGCGTGGGGAATGAGAACAAGGTTAAAAAGGTTAAACTCAAGGTTGGTGGTGTAACATGTACTATCCAAACCAACTCTGCACCTAATGGTTCATCAGGAAGTGGGTCCACTGCCAAGAGCACTCAATTGTCAGATTCCTCCAGACCACGCCAAAAGCAACAGTGCAATTCAGATGATAACCATTCTCCTTCAGATAAGAGGAGTGGCCTACAAGGCATTCCTTGGAAGAATTTTTCAAGGGGTGGATTTGTTCTTGGGAAAGAGGATTCTATGATGGGGAAGATGATGTCAGGAAAGAACACATCTAGTAAGCAAGGAGACAAGACTGAACCAGTTCGCAAGAGCAAGCGAGTACCAAAGAGGCGTGTAATGGATGGGGATTTTGGTGATGAAGATGAGGATGATGACGAGATTCGGTACTTGGAAAAGCTCAAAACGTCAAAAGTTTCTGCAGTGTATAGAGATGAAGAAGTAAGTAAGAAGCATCGAAAATTATCTAGTGTCTCTGATATGGATATTACTGCCTCATCAAGGTCAGTCAAGGATGGCAAAAGCAAGTCCAGATCAGATAGAATGTATGAGGACACAGATTATGAGGAAGATGAGGAGTCTGGTTCTGATGTTGAGCCTGAGCACAAGAAAAAGAGAAAACAGAAGAAGGAATCTGTTGATGTATTGATGGATGGTAAGAGGGAAATGACTCTCACTACACGCCAAAGGGCTCTTCAATCGAGTAAAGATGCCACTGCAGCTGGTGCAAGTTTAATTGAGTTTCCTAATGGGTTACCACCTGCTCCGCCTAGAAAGCAAAAGGAAAAGCTTTCAGATGTGGATCAGCAACTAAAGAAAGCCGAGGCTGCCCAGAGGCGTAGAATGCAAAATGAGAAGGCTGCTAGTGAATCTGTGGCTGAAGCTATCAGAAAAGTACTTGGTCAAGACTCTAGTAGGAAGAAACGGGAAGAGAAAATAAAGAAACGCCAAGAAGAACTAGCACAGGAGAAGGCGGCGAATGCGCAGATGCTTGCATCAAACACCATCAGATATGTGATGGGTCCTGCTGGGACAGTTGTTACTTTTCCCGAGGAGCTGGGCCTGCCAAGCATATTCAGCTCCAAACCCCCCAGTTATCCTCCTCCACGTGAGAAGTGTGCGGGTCCATCTTGTACCAACCCATACAAGTATCGGGATTCAAAGTCTAAGGTTCCCCTTTGCAGTCTGCGGTGCTACAAGGCAGTCCAGGAGACGATGGCGGCTATCTGTTGA 1755 0.4507 MEDLGGTRFDGLSNAARKKRSQTSRRPRPDSQPVSDGPSPLSSTPSDDAGKASSDENAGCNANPKRKEFNLNHYVSSVSSATTVEDGKSHKKSKMDGEFHVYYNNEPGHVSYNKRCSEGVLAPANWKGSSKSKDISEVESRSADVYAGRNFEGMSLGQSGVPLDGVGNENKVKKVKLKVGGVTCTIQTNSAPNGSSGSGSTAKSTQLSDSSRPRQKQQCNSDDNHSPSDKRSGLQGIPWKNFSRGGFVLGKEDSMMGKMMSGKNTSSKQGDKTEPVRKSKRVPKRRVMDGDFGDEDEDDDEIRYLEKLKTSKVSAVYRDEEVSKKHRKLSSVSDMDITASSRSVKDGKSKSRSDRMYEDTDYEEDEESGSDVEPEHKKKRKQKKESVDVLMDGKREMTLTTRQRALQSSKDATAAGASLIEFPNGLPPAPPRKQKEKLSDVDQQLKKAEAAQRRRMQNEKAASESVAEAIRKVLGQDSSRKKREEKIKKRQEELAQEKAANAQMLASNTIRYVMGPAGTVVTFPEELGLPSIFSSKPPSYPPPREKCAGPSCTNPYKYRDSKSKVPLCSLRCYKAVQETMAAIC 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3498 584 MobiDBLite consensus disorder prediction 270 291 - -
Dere01g3498 584 SMART PAPA_1_2 442 527 IPR006880 GO:0031011
Dere01g3498 584 MobiDBLite consensus disorder prediction 371 399 - -
Dere01g3498 584 Pfam HIT zinc finger 543 574 IPR007529 -
Dere01g3498 584 MobiDBLite consensus disorder prediction 302 332 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 341 358 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 1 73 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 474 494 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 185 494 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 400 414 - -
Dere01g3498 584 PANTHER INO80 COMPLEX SUBUNIT B 7 581 IPR029523 GO:0006338|GO:0031011
Dere01g3498 584 Pfam PAPA-1-like conserved region 443 526 IPR006880 GO:0031011
Dere01g3498 584 Coils Coil 480 500 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 185 215 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 433 461 - -
Dere01g3498 584 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3498 Dere-ChrDere01 49398776 49402086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3498 01 49398776 49402086 Dere01g3498 01 49398776 49402086 ECH