Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3475 ATGGATACTCTGTGTTTAAAAAATGCAATATCTGGGATAGCTCCGTTCATTTCTATCAGTGGATCATTAACTGCACGTCCGGATCCATCTCAAATAAGCTCGGTAGGTTGCTCAACAACGGAAAAATCGTCCCAGAAGTCAGTCTTCTCGAGATTCTCGTTTAAAAACCCTCTAAAATCTCTCTGGCCTGGAGGAGGTGGAAATAGCAGGTACAATGGATTGGCCCTTGACGACCCTGTTTTGGTGGACAACGGGGAAAAGAATGCTATTTACGAGGACAATGAGAGTGGTAATATGGGTCCGGAGGATCAAAATGGGAGCTGGATTTTTAAGATTTTGCATGTGAAGTCTATGTGGAGGGGAAAACAGGGGAAGGGAGGTAATGTGGCAATTGAAGGGGAGAGTCAAAGAAATGAGTCTAGCGATGATGATGAAGAATGTCATGGTTGTAGGGTTGACAACGATGACGAAGCAGAGTTTCAATTCGACAGAGATTCGTTTTCAAGAATGCTTCGGAGGGTGTCATTACCCGAAGCACGATTGTATGCGCAGCTGTCGTACCTGGGGAACTTGGCATACTCTATACCCAAAATCAAGCCAGAGAACCTGTTCAGATATTACGGTCTACGTTTTGTTACTTCATCAATGGAGAAGACAGAATTGACAACAACAGCTCGAATGAAAATGGCATCAGCTAAAACTCAAAAAGCAGAAACTAATAAGAAGGACAAAGGTGAAAGAAATGAGAACAGTAAATACAGGTCAAGTACATCTACTACCTCCTATCTCCATGCTCAGACCAAGAGCATGTTTCCATTCAATTTGTCGAAAGATGAGGTTGGTGGCGATTCACTTGAGGGAAACAACGAAGCTTTTGAGGGCATTGATATGTTAAACACAGAGGTGGCATCTTTGAAGGCTACTAAGGAAGAAGTGAAACAGGTTGTTACAGACGATCGGAATTTAACCCGTTCATCTCCTTGTGAATGGTATATATGTGATGATGACCAGAGTGGTACAAGATTTTTTGTTATTCAGGGATCTGAGTCACTAGCATCCTGGCAAGCAAACCTTCTTTTTGAGCCAATCCAGTTTGAGGGGTTCGATGTCCTTGTGCATAGAGGTATATATGAGGCCGCCAAAGGGATTTATCAACAGATGTTACCAGAAGTCCATGCTCACCTAAAAGCTGAAGGTCCTCGTGCAACATTCCGTTTCACCGGGCATTCACTTGGGGGAAGCTTGGCATTACTTGTGAATCTCATGCTATTGATAAGGCAAGAAGTGTCATTCTCATGTCTGCTACCCGTAATAACATTTGGTGCTCCATCCATTATGTGTGGGGGTGATAGTCTGCTGAAGAAGCTTGGATTGTCGCGGAGTCATGTTCAGGCAATTACACTGCACAGAGACATAGTATCACGAGCCTTTTCTTGCAAATACCCTAATCACGTTGCAGAGCTACTAAAGGCTGTTAATGGTAGCTTTCGCAATCATTCATGTCTTAATAACCAGCCAGATGATAAATTTTCCCCACAGCATCCCCTCCTTCCCCCAGGCTGTGGTCTGTATCTACTGAGTGGTCATTTGTCTGAGTGCAAGAAGGAAAGCAAGCAGCTCGAAGCTGCTCAGTTGTTGTTCTTGAACTCACCTCATCCCCTTGAGATCTTAAGGGACCGGTCTGCTTATGGATCTGGAGGAACCATAATAAGGGATCATGACATGAAGTCTTACCTAAAATCCATAAGAACTGTAATTCGTGAAGAACTAAACAGCATCCGTAAAGCAAGGAGAAGGCTCCAGCGCAATGCATGGCGGCCACTGTTGGCTCCCCAGGGGGGAAGAGATGCCAGCATTGTTGTTGGGAGGTTGATGGTATCAGTCAAAATGGGTCAAGACTTGCCCACTTTCTCTGGCATCCTACGGACAGGGAAAGAGTCATGGAAAAGCCTCACAACGTTAATTGCATCCCAACATATGCATTTTTTTGCGGTGATTTTATTGCCCGCACGAATGCTGCTATTGGGGGCACATAGCATTATTAGATTCCGTTGA 2055 0.4438 MDTLCLKNAISGIAPFISISGSLTARPDPSQISSVGCSTTEKSSQKSVFSRFSFKNPLKSLWPGGGGNSRYNGLALDDPVLVDNGEKNAIYEDNESGNMGPEDQNGSWIFKILHVKSMWRGKQGKGGNVAIEGESQRNESSDDDEECHGCRVDNDDEAEFQFDRDSFSRMLRRVSLPEARLYAQLSYLGNLAYSIPKIKPENLFRYYGLRFVTSSMEKTELTTTARMKMASAKTQKAETNKKDKGERNENSKYRSSTSTTSYLHAQTKSMFPFNLSKDEVGGDSLEGNNEAFEGIDMLNTEVASLKATKEEVKQVVTDDRNLTRSSPCEWYICDDDQSGTRFFVIQGSESLASWQANLLFEPIQFEGFDVLVHRGIYEAAKGIYQQMLPEVHAHLKAEGPRATFRFTGHSLGGSLALLVNLMLLIRQEVSFSCLLPVITFGAPSIMCGGDSLLKKLGLSRSHVQAITLHRDIVSRAFSCKYPNHVAELLKAVNGSFRNHSCLNNQPDDKFSPQHPLLPPGCGLYLLSGHLSECKKESKQLEAAQLLFLNSPHPLEILRDRSAYGSGGTIIRDHDMKSYLKSIRTVIREELNSIRKARRRLQRNAWRPLLAPQGGRDASIVVGRLMVSVKMGQDLPTFSGILRTGKESWKSLTTLIASQHMHFFAVILLPARMLLLGAHSIIRFR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3475 684 MobiDBLite consensus disorder prediction 227 261 - -
Dere01g3475 684 CDD Lipase_3 294 475 - -
Dere01g3475 684 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 36 673 IPR043367 GO:0008970
Dere01g3475 684 Gene3D alpha/beta hydrolase 293 515 IPR029058 -
Dere01g3475 684 SUPERFAMILY alpha/beta-Hydrolases 324 506 IPR029058 -
Dere01g3475 684 Pfam Lipase (class 3) 343 479 IPR002921 GO:0006629
Dere01g3475 684 Coils Coil 295 315 - -
Dere01g3475 684 MobiDBLite consensus disorder prediction 235 251 - -
Dere01g3475 684 Coils Coil 583 603 - -
Dere01g3475 684 MobiDBLite consensus disorder prediction 124 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3475 Dere-ChrDere01 49220654 49223564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3475 1 684 Acyl Lipid Metabolism Gene Families AT1G02660 50.276 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3475 01 49220654 49223564 Dere02g0495 02 4828088 4831500 CCT
Dere01g3475 01 49220654 49223564 Dere01g3475 01 49220654 49223564 ECH