Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3458 ATGAATATAGTGTACGGTTCGCAGATTTTAGATGGTTCTATTTCTCCGCTGAGATCACTTATATACCGCGAAATACAGAGTGAGGCAGTGGAGGGAAAGAATTACAGAAGTAGAGGAGCACTAGAAAAGAGCGACGGTGCCCACGATAGCACCCATGCCTTTTCATGGATTCCTCTTCTTCGTCGTCTTCTTCATCTTCTTCTTCTCTCTCCTCTGCTTTTTCTCTCCCCAATATCGCTTCCTCCCCACGGCATCCTTACTTTGATTGATACACATACGCCGACAGGAACCCTACCCTTCCTTTCGTCGATTCTGGCGGATCGTTTAGTTTTCAAGTCCAACAAGAAGAGGAGGAGGGGGTTTTACGGTGCCAAAATGTTGTGGATTATGAGATTTTCAGGATTTATCTCGGCCGCAATGGCCATGGTTGTTCTCTCTCCATCTTTGCAATCATTTCCTCCGGCGGAAGCCATCAGATCCTCCCACCTCGACGGCTATCTCCGTCTGCCAGTCCAGATGCCCTCCACCGATAGTGAAAACCGATTTTCGTTCCGGAAAGCCTCTGCATTCCGCAATGCCGATGAATGTGGTTCGAATCCAAGGGGGGTTTCAGGGGAAATTAGTATTTGCGACCCTTCTTTGGTACACGTAGCCATAACACTTGACGTTGAATACCTGCGCGGTTCAATTGCTGCTGTGCACTCCATATTGCAGCATTCCTTATGCCCGGAAAGCATCTTCTTTCACTTCCTCGTGTCTGAAGCAAATCTGGAGTCGCTAGTTCAATCGACGTTCCCCCAGTTGAAGTTCAAGGTGTATTACTTCGACCCAAAGATTGTGAGAAACCTGATCTCAACCTCCGTCAGACAAGCGCTTGAACAACCCCTGAATTATGCTAGGAATTACTTGGCGGATCTTCTGGAAGGTTGCGTGCGCCGAGTGATTTACCTTGATTCTGATCTAGTTGTGGTCGACGATATTTCCAAACTGTGGAGTACGAGCTTGGGCTCTAAAACAATCGGGGCACCGGAATACTGTCACGCGAACTTTACGAAGTATTTCACGGCGGGGTTTTGGTCGGACAAGCGGTTCTCCGCCACTTTTGCGCGGCGGAAACCGTGTTATTTCAACACCGGAGTGATGGTTATAGATCTAGTCAAATGGAGGAAAGCCCGGTACACGAAGCACATCGAGAAATGGATGGAAATCCAGAAGAGCGATCGGATCTACGAACTTGGTTCGCTGCCGCCATTCCTACTGGTTTTTGCAGGACACGTGGCGCCCATCGAGCACCGGTGGAACCAACACGGCCTGGGTGGTGACAACGTCAGAGGCAGCTGTCGAGACTTGCACCCTGGTCCAGTTAGCCTGTTGCATTGGTCCGGTAGCGGCAAGCCGTGGCTCAGGCTTGACTCTAAACGCCCCTGCCCGCTCGATGCCCTATGGGCTCCGTACGATTTGTACGGGCTCACACCCTGA 1479 0.5037 MNIVYGSQILDGSISPLRSLIYREIQSEAVEGKNYRSRGALEKSDGAHDSTHAFSWIPLLRRLLHLLLLSPLLFLSPISLPPHGILTLIDTHTPTGTLPFLSSILADRLVFKSNKKRRRGFYGAKMLWIMRFSGFISAAMAMVVLSPSLQSFPPAEAIRSSHLDGYLRLPVQMPSTDSENRFSFRKASAFRNADECGSNPRGVSGEISICDPSLVHVAITLDVEYLRGSIAAVHSILQHSLCPESIFFHFLVSEANLESLVQSTFPQLKFKVYYFDPKIVRNLISTSVRQALEQPLNYARNYLADLLEGCVRRVIYLDSDLVVVDDISKLWSTSLGSKTIGAPEYCHANFTKYFTAGFWSDKRFSATFARRKPCYFNTGVMVIDLVKWRKARYTKHIEKWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRDLHPGPVSLLHWSGSGKPWLRLDSKRPCPLDALWAPYDLYGLTP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3458 492 FunFam Hexosyltransferase 216 476 - -
Dere01g3458 492 SUPERFAMILY Nucleotide-diphospho-sugar transferases 215 489 IPR029044 -
Dere01g3458 492 Pfam Glycosyl transferase family 8 216 469 IPR002495 GO:0016757
Dere01g3458 492 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 216 476 IPR029044 -
Dere01g3458 492 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 145 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3458 Dere-ChrDere01 49096248 49100113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3458 126 489 Glycosyltransferase AT3G62660 81.044 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3458 01 49096248 49100113 Dere02g0511 02 4938496 4939608 CCT
Dere01g3458 01 49096248 49100113 Dere01g3458 01 49096248 49100113 ECH