Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3436 ATGACTCAGCGTAGGCTTGGTCGAGTTCCCAGCATCAGAGACCGAGTAGAGGATACTCTCTCTGCTCACCGTAACGAACTTGTTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAACGGATTTTGCAACCCCATAATTTGATTGATGAGCTTGAAAGTATCCTTGGTGAGGATCAAGCATCACAGGACCTAAAAAATGGTCCCTTTGGTGAAATTCTCAAGTCCGCGCAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGCAGTTCGTCCGAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTTTGAACTCAGTGTTGAGCAATTGAGCGTCCCTGAATATCTTCACTTCAAAGAAGAACTTGTAGATGGAACGACTCATGACAATTTTGTATTGGAGCTTGATTTTGAGCCATTCAATGCTACATTCCCTCGTCCATCCCGGTCATCATCCATTGGCAATGGTGTTCAGTTTCTCAATCGTCACCTTTCTTCAATTATGTTCCGAAACAGGGATTCTTTGGAGCCATTGCTTGATTTCCTCAGAGTTCACACGTATAAAGGGCATGCACTAATGTTAAATGACCGCATTCAAAGCATATCCAAACTTCAGTCTGCTTTGGTCAAAGCAGAGGATTATCTTTCTAAGCTTAAACCTGATACAGGCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCCGAAAGAGTCTTGGAGATGATGCATCTTCTCTTGGACATTCTCCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGCAGAGTACCTATGGTGTTTAATGTTGTCATATTGTCTCCTCATGGCTACTTTGGGCAAGCCAATGTCTTAGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTGGATCAAGTGCGTGCCCTTGAGAATGAGATGCTTCTTAGAATCCAGAAGCAAGGGCTGGATTTCACTCCTAGGATTCTAATAGTTACCAGGTTGATACCTGATGCAAAAGGGACAACATGCAACCAGCGGCTAGAAAGAGTCAGTGGCACTGAACACACTCATATTTTGCGAGTTCCTTTCAGATCAGAGAAAGGAATTCTCCGCAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAGGGTTATCCTGATTTCATCATTGGAAACTACAGTGATGGAAATCTTGTTGCATCTTTATTAGCTTATAAAATGGGAGTTACTCAGTGCACAATTGCGCATGCACTAGAGAAAACGAAATATCCAGATTCAGATATATATTGGAAAAAGTTTGAAGATAAGTATCATTTTTCATGCCAATTCACTGCTGACCTAATAGCGATGAACAATGCTGACTTTATCATCACCAGTACATATCAAGAGATTGCAGGAACGAAGAATACTGTTGGCCAGTATGAGAGCCACACTGCTTTTACTCTTCCTGGGCTTTACAGGGTTGTCCATGGCATCGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGGGCAGATATGAGCATGTATTTTCCCTACTCTGAAAAGCGGAAAAGACTTACCGCCCTGCATCCCTCAATCGAAAAGTTGTTATATGATCCTGAGCAGACAGATGAGCACATTGGTACACTCAAAGACCGGTCAAAGCCCATAATTTTTTCCATGGCAAGGTTAGACAGAGTGAAAAACATAAGTGGTTTGGTAGAAAGCTATGGTAAGAACAGCAAATTGAGGGAACTGGTCAATCTGGTTGTAGTAGCTGGCTATATTGATGTAAACAAGTCCAGGGACCGAGAAGAAATAACAGAAATTGAGAAGATGCATGATCTCATGAAGACATATAGCTTAGATGGTGATTTTCGGTGGATAGCTGCCCAAACAAATAGAGCACGAAACGGTGAGCTGTATCGCTACATAGCAGACACCAAAGGTGCTTTCATTCAGCCTGCATTCTATGAAGCTTTTGGACTCACAGTTGTGGAGGCCATGACTTGTGGGCTCCCCACATTTGCTACTTGCCATGGTGGTCCTGCTGAGATAATTGAGCATGGTATATCAGGATTTCATATTGATCCTTATCATCCTGACCAAGCTTCTGGACTATTGGTTGAATTCTTCCAACGGTGCAAGGAGGACCCAAGCCATTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAAAGGTACACATGGAAGATCTATTCTGAGAGGCTCATGACCTTGGCGGGAGTTTATAGCTTCTGGAAGTATGTCTCCAAACTAGAGAGACGTGAAACTCGACGATATCTTGAGATGTTCTACATCCTCAAGTTCCGCGATTTGGCAAATTCTGTTCCGCTAGCCAAGGATGATGCAAATTAA 2436 0.4286 MTQRRLGRVPSIRDRVEDTLSAHRNELVSLLSRYVAQGKRILQPHNLIDELESILGEDQASQDLKNGPFGEILKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVPEYLHFKEELVDGTTHDNFVLELDFEPFNATFPRPSRSSSIGNGVQFLNRHLSSIMFRNRDSLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDYLSKLKPDTGYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSMYFPYSEKRKRLTALHPSIEKLLYDPEQTDEHIGTLKDRSKPIIFSMARLDRVKNISGLVESYGKNSKLRELVNLVVVAGYIDVNKSRDREEITEIEKMHDLMKTYSLDGDFRWIAAQTNRARNGELYRYIADTKGAFIQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGISGFHIDPYHPDQASGLLVEFFQRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLAKDDAN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3436 811 NCBIfam sucrose synthase 24 805 IPR012820 GO:0005985|GO:0016157
Dere01g3436 811 Gene3D Glycogen Phosphorylase B; 282 799 - -
Dere01g3436 811 FunFam Sucrose synthase 3 394 520 - -
Dere01g3436 811 FunFam Sucrose synthase 148 277 - -
Dere01g3436 811 PANTHER - 8 808 IPR012820 GO:0005985|GO:0016157
Dere01g3436 811 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Dere01g3436 811 FunFam Sucrose synthase 11 147 - -
Dere01g3436 811 Pfam Glycosyl transferases group 1 561 741 IPR001296 GO:0016757
Dere01g3436 811 Gene3D - 148 277 - -
Dere01g3436 811 Gene3D Glycogen Phosphorylase B; 529 756 - -
Dere01g3436 811 Gene3D - 11 147 - -
Dere01g3436 811 FunFam Sucrose synthase 529 756 - -
Dere01g3436 811 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3436 Dere-ChrDere01 48876472 48882343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3436 1 809 Glycosyltransferase AT4G02280 84.672 0.0 1454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3436 01 48876472 48882343 Dere01g3436 01 48876472 48882343 ECH