Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3411 ATGCCATCAGAACTCATTTTCAGAGGGCACGAAGCCCAGCCCGTCCCTGATGCCTACTCCCCCAAGCCCCTCAAGCCATGGCTCTCCGTCACTCGCCCAATTCGCTACTTGCTCCGCGAGCAGCGACTCCTTTTCGTCCTGGTCGGCATTGCCATAGCCACCTTGTTCTTCACCCTCTTGCCTTCCTCTCGCAACCCTGCCCACCATGACTCCGTTCCCATCCCTTACTTTCAGCACGAGTCCACCCAGTGGTTCGATAAGCCCAGCAGCGACCGCTCAGTTGCCTACAGGATGCCCGTGCACACCGTCGGGAAGGTCCCTTTGGGGATTAAGAGAAAGGGGCTCCGGATCGTGGTGACAGGCGGGGCGGGTTTCGTCGGGTCGCACCTCGTGGATCGTCTGATTGCCAGAGGCGACAGCGTGATCGTGGTGGATAATTTCTTCACGGGAAGGAAAGAGAACGTGATGCACCACTTTGGGAATCCCAGATTCGAACTCATCCGCCACGACGTTGTTGAGCCCCTGTTGCTGGAGGTGGATCAGATCTACCATCTTGCATGCCCTGCATCCCCCGTCCATTACAAGTTCAACCCGACGAATGTGGTGGGGACTTTGAACATGCTGGGGCTGGCTAAAAGAGTCGGCGCAAGGTTTTTGTTAACGAGTACCAGTGAGGTTTACGGTGATCCTCTTCAACACCCTCAGAAGGAGACTTACTGGGGCAACGTCAATCCTATTGGTGTCCGAAGCTGCTACGACGAAGGAAAGCGTACGGCCGAGACGTTGACTATGGATTACCACAGAGGAGCAGGCGTGGAGGTTAGAATTGCTAGAATCTTTAACACCTACGGTCCCCGAATGTGCTTAGATGATGGTCGTGTTGTTAGTAACTTCGTCGCTCAGGCACTAAGAAAGGAACCCTTGACTGTCTATGGGGATGGAAAGCAGACAAGGAGTTTTCAGTATGTTTCTGATTTGGTGGATGGTCTGATGCGCCTTATGGAGGGAGAGCATGTGGGACCATTCAATCTTGGAAATCCCGGTGAATTCACAATGCTTGAACTTGCTAAGGTGGTTCAAGAAACGATAGATCCAGATGCGAAGATAGAGTACAGGCCCAATACAGAGGATGACCCACACAAGAGGAAGCCTGATATTTCAAGGGCTAAGGAGCTGTTAGGGTGGGAGCCCAAGGTGGACCTGCGCAAGGGGCTTCCTTTGATGGTTTCTGACTTCCGACAACGTATTTTTGGAGACCACAAGGAGGGTTCAACCTCCGCCTAA 1284 0.5327 MPSELIFRGHEAQPVPDAYSPKPLKPWLSVTRPIRYLLREQRLLFVLVGIAIATLFFTLLPSSRNPAHHDSVPIPYFQHESTQWFDKPSSDRSVAYRMPVHTVGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVDGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYRPNTEDDPHKRKPDISRAKELLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGSTSA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3411 427 FunFam UDP-glucuronic acid decarboxylase 1 232 417 - -
Dere01g3411 427 FunFam UDP-glucuronic acid decarboxylase 2 111 231 - -
Dere01g3411 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 417 IPR036291 -
Dere01g3411 427 CDD UGD_SDR_e 116 413 - -
Dere01g3411 427 Pfam GDP-mannose 4,6 dehydratase 119 406 IPR016040 -
Dere01g3411 427 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 25 420 IPR044516 GO:0042732|GO:0048040|GO:0070403
Dere01g3411 427 Gene3D - 111 232 - -
Dere01g3411 427 Gene3D - 233 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3411 Dere-ChrDere01 48663218 48666503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3411 20 427 Miscellaneous Gene Families AT4G00110 24.554 1.54e-20 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3411 01 48663218 48666503 Dere01g3411 01 48663218 48666503 ECH