Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3400 ATGGCGACCTCAGAGAAGCAAGTGATGGTGGTTGGCGTCGATGACTGCGATCACAGCACTTATGCTCTCCAATGGACTCTCGATCACTTCTTCACCCCCGTTCCTAATCCTTTCTTCAAGCTCGTCCTTGTTCATGCCAAGCCTTCTGCTGCTTCCGCTGTTGGCCTCGTTGGCCCTGGAGCCGCTGACGTTTTGCCTATTGTCGATGCCGATTTGAGAAAGACTGCTGCCAGAGTTGTCGAAAAAGCTGAAGAACTCTGCATCGAGAAATCGATGATCGAGGTTACAGTGGAAGTGATGGAAGGTGATGCAAGAAATGTTCTTTGCGACGCCGTGGAAAGGCATCATGCTTCAATGTTGATCGTGGGTAGTCATGGTTATGGGACAATAAAAAGGTAA 399 0.4937 MATSEKQVMVVGVDDCDHSTYALQWTLDHFFTPVPNPFFKLVLVHAKPSAASAVGLVGPGAADVLPIVDADLRKTAARVVEKAEELCIEKSMIEVTVEVMEGDARNVLCDAVERHHASMLIVGSHGYGTIKR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3400 132 CDD USP_Like 9 132 - -
Dere01g3400 132 Gene3D HUPs 1 132 IPR014729 -
Dere01g3400 132 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 132 - -
Dere01g3400 132 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 132 - -
Dere01g3400 132 Pfam Universal stress protein family 8 132 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3400 Dere-ChrDere01 48568237 48569467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3400 01 48568237 48569467 Dere01g3400 01 48568237 48569467 ECH