Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3396 ATGAGTCGTCATCCTGAGGTTAAGTGGGCTCAGAGGGTTGACAAGGTCTATATCACAGTGCAATTGCCAGATTCCAAAAATGCTAAAGTGGATCTAACTCCGGATGGCATTTTTACTTTTTCTGCTAGTGCTGGTGCCCAAGACCAACTGTATGAGTTAAAATTGGAGCTGTTTGACATGGTCAATGTAGAGGAGAGCAAAATTAATGTAGGAGTGAGAAGCATATTCTGCGTGGTGCAGAAGGCAGAGAATGGTTGGTGGAAAAAGTTACTGCGTGGTGAAGGCAAGGCTCCACATTATGTGAAAGTAGATTGGGATAAATGGGTGGACGAGGATGATGATAATGGTCTTGGTGACTTGGACTTGGGAGGGATGGACTTCTCGAAATTTGGCGGGATGGGAGACGATGCAATGGGTGAAGATTTTGAGGATAGTGATGATGAAGAAGTGTCAAAGCCTGCTGGAGAACACGACACTAACAAGGACAAGGAGGAAGGTTCTAAGGATTGA 510 0.449 MSRHPEVKWAQRVDKVYITVQLPDSKNAKVDLTPDGIFTFSASAGAQDQLYELKLELFDMVNVEESKINVGVRSIFCVVQKAENGWWKKLLRGEGKAPHYVKVDWDKWVDEDDDNGLGDLDLGGMDFSKFGGMGDDAMGEDFEDSDDEEVSKPAGEHDTNKDKEEGSKD 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3396 169 Pfam CS domain 6 81 IPR007052 -
Dere01g3396 169 MobiDBLite consensus disorder prediction 131 169 - -
Dere01g3396 169 MobiDBLite consensus disorder prediction 150 169 - -
Dere01g3396 169 CDD p23_hB-ind1_like 5 111 - -
Dere01g3396 169 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 121 - -
Dere01g3396 169 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 155 IPR045250 GO:0051879
Dere01g3396 169 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Dere01g3396 169 Gene3D - 2 120 IPR008978 -
Dere01g3396 169 SUPERFAMILY HSP20-like chaperones 1 144 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3396 Dere-ChrDere01 48554081 48557088 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3396 01 48554081 48557088 Dere01g3396 01 48554081 48557088 ECH