Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3377 ATGGTCCATCATTGGCAGATGGATGTTCTTTGCTTGGATGACAGCACAGAAGGCACTGAAGGGAAATCTTCTGAGGGGCCCCCCACTTCAGGTTCCTCTGATATGGATGATAAGTTTGGAGACCCTCAAGTGCTTCCTCGTGTGGGTGACCAATATCAGGCAGAAATTCCTCCATTGATTTCAGTGCCTTGTTTTTCTCAGCTTACAAAGAAGTTTAGAGATTCAGAAGTCAAGGTAAATATGACTAAGTCACAGGGACTTCCCATTTCTCATATGTTGGCTTATTGTAAAGTTGAAAGCAGCTCCGAAACTTTAGAATCTTCCATCAGTGAAGAAGGGCAAGTTATTTCTGAGAATGATTGTCCACAAGTTAATGTTGAACCTCTGACTACTTTACTTGGAGAAGGAAAGACTGTGACTGGATTTTCAAACTCTAAGTCTTCTGTTGATTGTGATGAGATGGGTATTGACACATGCCCAGAACCAAAGATTGAGTTGGATCAGGCAAAAGACATGTATCTTCTCACTGGCTTCTCGGTTGAAACCTGGACTGTCATTGAATATAACATTTTTCTCCTTGGCCTCTATGTCTTTGGGAAAAATTTTAAATTTGTAAAGAGATTTGTTGAGAGTAAAAGTATGGGAGACATACTGTCTTTCTACTATGGACAGTTTTATGGGTCTAAAGGATATCGACGGTGGTCAAATTGTCGGAAGTTAAGAAATAAGCAGTGCATATATGGGCAAAAAATATTCACAGGATGGAGGCAACAGGAATTGCTGTCACGATTATTTTATCATGTGTCAGGGGAGTGTCAAAATACGTTGGTTGAGCTTTCTAGGAATTTTGGGGTGGGAAAGATGCCTTTTCAAGACTATGTATTTGCTTTAAAGGACGCTGCTGGCATTGGCATGCTCATAGATGCAGTCGGTATTGGAAAAGGGAAGCAAGATCTCACTGGCACTGCCGTTGAGCCAATGAAGATCAGTCATGTCTTCTCTCTTCGCCCTGAAATACCAGTTGGTAAAGCTTGCTCCTCTCTTACATCTGCAGACATAATCAAGTTTTTGACGGGAGGTATTAGGTTAAGTAAAGCTCGATCCAGTGATCTCTTTTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAAAGGGTGGCACTCTGAGCAGCCTAAGGATCGTGTTGTTTCTGGTTCAAAACAATCTTTGGTTTTTCTTACCCCTGGTGTTAAGAAATTTTCAAGATGGAAACTGGTGAAAGGTAACCACTACTTTGATTCTGTAAGTGATGTACTGAATAAAGTAGCATCTGACCCAGGGCTTCTTGAGAATGAAATTCAAGTGACAGATGGCATAGTAGATGGAGAGCAAAGACAGGACAAAGACAAACAGGGCCCAGATGGTTTGTTAAATAAGCAACAACATCGATACCTTAAACCTCTTAGTTCAACTTGCAACCAAATGAAATTTACAGTTGTGGACACCAGCATAATTTATGATTTGGATCGACACAAAGTGAGAGAGCTGAGAAGTTTACCTTTTGAATCTCTGAATATGGATACTTTCATGAGCCACTCTTCTTGTGGATCTGAGGAGGATACATCTGAAGATACAGAAAATCAAGGTGAACAAACTAATTCTTCAAGCCCTGCAGAGGAGTTTGCTTATAAGGGGGCGACTGTGGAGTCAATAGATTGTACTCATATATCAGAAGCCTTAAATGCCAATGATGTGGCTGTAAAAAATAATAAATGTCATTCGGATCTTCATAATGACAAGCATTCAGAAGAGGCTGATAAGTCCTATTTCATTCAAAATGTGACATCTTGTTGCTCTTTGCTCTCCATCAACCTTGAAGAGCTAAGGCACTGCAATGAAAGCACTCCCACAGAGAGGAAGTTGGATTTAAATGAGCCTACTTCACAATCAAATCTGCATGATGCATCGGTGGGCTTGGTTCTGTCTGTAGATTTACAAACTATGTCTTCCTCAAGTTCTCTGGCTAAAGGCAGTTCAAATGGGAGCAATGAAGGCAGTGCTACTCAGAAGCACCTGGATGGAGAAGTATGTGCAGAAAAACCTGAAACCAGGATGTTGATTGACTTGAATCTTCCTCATGTTCCACCAGAGTTGGGAACTGAAGTGGATACACTGCAAGATAATGAAAACCGATGTGCAAGTACATCATTCTCGTCGTATGAGAAAACCCAGCTCTATCAGATAGAGGAGCTTCCTAATGTTCATAAAGAGCAGCAACCTTGTATTGTTAGCCGTCGCCAGAGTACAAGGAATCGGCCATTGACCACAAAAGCATTGGAAGCTCTTGAGTATAGCTTTCTTAACTCAAAGAGGAAGAGAAAGAATGTGGAATACCCGCACAATAACCCGAAGTCACAATGTTTACATGCGAGTAGTGGGACAACTGTTAGAATTAACTGTAATAATGGCACTGGTAATTTCATGGCAGACGCAAAAGCAGATGAAGAGAATAAGATCCAGGCATATGGCACTAGCATTAGCGTCAACCTTAATTGCGAAAAAGATTGA 2544 0.4116 MVHHWQMDVLCLDDSTEGTEGKSSEGPPTSGSSDMDDKFGDPQVLPRVGDQYQAEIPPLISVPCFSQLTKKFRDSEVKVNMTKSQGLPISHMLAYCKVESSSETLESSISEEGQVISENDCPQVNVEPLTTLLGEGKTVTGFSNSKSSVDCDEMGIDTCPEPKIELDQAKDMYLLTGFSVETWTVIEYNIFLLGLYVFGKNFKFVKRFVESKSMGDILSFYYGQFYGSKGYRRWSNCRKLRNKQCIYGQKIFTGWRQQELLSRLFYHVSGECQNTLVELSRNFGVGKMPFQDYVFALKDAAGIGMLIDAVGIGKGKQDLTGTAVEPMKISHVFSLRPEIPVGKACSSLTSADIIKFLTGGIRLSKARSSDLFWEAVWPRLLAKGWHSEQPKDRVVSGSKQSLVFLTPGVKKFSRWKLVKGNHYFDSVSDVLNKVASDPGLLENEIQVTDGIVDGEQRQDKDKQGPDGLLNKQQHRYLKPLSSTCNQMKFTVVDTSIIYDLDRHKVRELRSLPFESLNMDTFMSHSSCGSEEDTSEDTENQGEQTNSSSPAEEFAYKGATVESIDCTHISEALNANDVAVKNNKCHSDLHNDKHSEEADKSYFIQNVTSCCSLLSINLEELRHCNESTPTERKLDLNEPTSQSNLHDASVGLVLSVDLQTMSSSSSLAKGSSNGSNEGSATQKHLDGEVCAEKPETRMLIDLNLPHVPPELGTEVDTLQDNENRCASTSFSSYEKTQLYQIEELPNVHKEQQPCIVSRRQSTRNRPLTTKALEALEYSFLNSKRKRKNVEYPHNNPKSQCLHASSGTTVRINCNNGTGNFMADAKADEENKIQAYGTSISVNLNCEKD 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3377 847 Gene3D - 177 234 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 663 681 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 453 468 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 13 45 - -
Dere01g3377 847 PANTHER ATROPHIN-RELATED 20 784 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 451 471 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 663 684 - -
Dere01g3377 847 MobiDBLite consensus disorder prediction 522 550 - -
Dere01g3377 847 SUPERFAMILY Homeodomain-like 181 227 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3377 Dere-ChrDere01 48391984 48395975 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3377 01 48391984 48395975 Dere01g3377 01 48391984 48395975 ECH