Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3366 ATGCCACGAAACCATGGTGACAACGTAATCGGGCACTGCACTACAGGGTATTGGAAATATCGCCGTCTCCGTCCTGGGGTTGCTCCAATGGAGGACACCCAAGAATCGGAGAATAAGACATGTGAAGAAGTGATTTCTGACAAACCATCCCAAAATAAGGATGAAAATCTTGATGAAGTGCTTTCACGGCACAGGAAAGAGATATCACTGCTGCAGAAGAAGGAAATTGAACTAAAAAAGGCAGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCCAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTAAGCTTAAAGAGAAGCATGCTGAAGAACTGTCTAGATTAGGCTTTAGCAATAGCAATGGAAATGAAAAGAGCAATTTGGACAGTTTGATGAAAGCCATAGCTGGAGTATCTGTTACCAGCCAACCCGATCATTCAAAGGTTAGCAAGGCCAAACAAAGGCGAGAAAGAAGGGCTCAGCAGGAAGCAGAAAGGGAGCTGAGAATCCAAGCTGAGCAGAGTGACATTTTAAGTGATCGTATGGTGGAAAATGAAAAGTTAGAAAGAAAGCTGAAGCCTCTTGGTTTGATTGTCAATGAAATAAAGCCAGATGGGCATTGCCTTTATAGAGCTGTTGAGGATCAGTTGGCCCTCTTCTCTGGGGGTACATCTCCTTATACATACCAAGAACTTAGAGAAATGGCAGCGACTTATATGAGAGAGCATACATCCGACTTCCTTCCATTTTTCCTGTCAGAGAACCTGGTAGAAAGTGATTTTGATGAATCACTTGCCCAGAAGTTTGAAAATTACTGTAAAGAAGTGGAGTCGACAGCATTATGGGGTGGACAACTAGAGCTTGGCGCCTTGACTCATTGCCTGGAAAAGCATATTATGATATTTTCAGGGTCCTTCCCAGATGTTGAGATGGGGAAAGAGTACAAATCTGATGGCGGTACTGATTCCATTAAATCAAGTATTTTGCTTTCATACCATAAGCACGCTTTTGGACTGGGTGAGCATTATAATTCCTTGGTCCCTGACATGATCAATTAG 1071 0.4323 MPRNHGDNVIGHCTTGYWKYRRLRPGVAPMEDTQESENKTCEEVISDKPSQNKDENLDEVLSRHRKEISLLQKKEIELKKAAARGSKAEQKAKKKQVEEEVSQLSAKLKEKHAEELSRLGFSNSNGNEKSNLDSLMKAIAGVSVTSQPDHSKVSKAKQRRERRAQQEAERELRIQAEQSDILSDRMVENEKLERKLKPLGLIVNEIKPDGHCLYRAVEDQLALFSGGTSPYTYQELREMAATYMREHTSDFLPFFLSENLVESDFDESLAQKFENYCKEVESTALWGGQLELGALTHCLEKHIMIFSGSFPDVEMGKEYKSDGGTDSIKSSILLSYHKHAFGLGEHYNSLVPDMIN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3366 356 ProSiteProfiles OTU domain profile. 201 353 IPR003323 -
Dere01g3366 356 Pfam OTU-like cysteine protease 207 347 IPR003323 -
Dere01g3366 356 Gene3D - 187 352 - -
Dere01g3366 356 SUPERFAMILY Cysteine proteinases 185 352 IPR038765 -
Dere01g3366 356 MobiDBLite consensus disorder prediction 142 170 - -
Dere01g3366 356 PANTHER OTU DOMAIN CONTAINING PROTEIN 62 351 - -
Dere01g3366 356 MobiDBLite consensus disorder prediction 152 170 - -
Dere01g3366 356 Coils Coil 71 114 - -
Dere01g3366 356 CDD OTU_plant_OTU5-like 192 351 - -
Dere01g3366 356 MobiDBLite consensus disorder prediction 35 57 - -
Dere01g3366 356 FunFam Cysteine proteinases superfamily protein 187 352 - -
Dere01g3366 356 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3366 Dere-ChrDere01 48247843 48252018 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3366 01 48247843 48252018 Dere01g3366 01 48247843 48252018 ECH