Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3322 ATGCTCAAACTCTTCAACAAGAGCCTCCGTCGCTTATGCTCCAATCTCCGGTGGCCACTTCGCCGCCGTTCCAGGTCCAAAATCGTCATCAAAAGGTTCGGAAAACCCAACCCAAAACCTCCAAATGACACTAAACTGGAATCAAATATTAATGGATTAGCCTTGGTTCATCCCAATGGCCAGTTGGCTAGCCCAGAATCACAGAAACCAGTACGGATTGCGACATTTAACGCTGCCCTGTTCTCCATGGCACCTGCGCTTCCCAAGGCAGAAAAAGGAGCCACCTTTGACGATGAAAATGGAGGTGTCCTGAAACCCAGAAGACCCTTCGACGGGAATTTACGGGCAAAGTTAGCGAATGATCGCCCGAAAAGCATACTAAAGCAATCTCCTCTGCATCCCAATTCCATGAATAGTCCAGACAATCTCACCAAGCAACAGAAGTTCACGAAATCGAAGCTGAGAGTCTCGATCAATCTACCAGACAACGAAATTTCTCTACTGCGAAATCGGCAACTGAGCTTCTCCGAGTACGAAAAGGAGGGATCATCGAATGTCTCTAAAAGGAAGGTTCCCATGAGACCCTCTGTGAGCTTTTCGGGTTATTCTGGAAATGGGGTGGACGCACAGAGCTATAGAAGCAGTAGAACAGTGTTGGATGTTCTGAGAGAATTGGATGCAGATATTTTGGCGCTGCAAGATGTGAAGGCAGAGGAAGAAAATGGGATGAAGCCATTGTCTGATTTGGCTGCCACACTGGGAATGAACTATGTGTTTGCAGAAAGCTGGGCTCCGGAGTACGGCAACGCCATCTTATCTAAGTGGCCGATTAAACGGTGGAAAGTTCAGAAAATCTTTGACGACACCGATTTCAGGAATGTTCTGAAGGCCACTATTGATGTACCTCAAGCAGGAGAAGTCAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGATAAATGCAATAATCCAGTGTAACGATGAACCTCACATCTTGGCTGGAGGTCTGAATTCACTCGACGAAACTGATTATTCCCAAGAAAGATGGACAGACATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAGATATCTGAAGAGTAAACATTACACAGATGCAAAAGAATTTGCAGGGGAATGCGAGTCAGTTGTCATGATTGCCAAAGGCCAAAGTGTCCAAGGAACATGTAAGTATGGAACTCGGGTAGATTACATATTATCATCCTCAAATTCTCCATTTAAGTTCGTTCCTGGATCCTATTTAGTCCTCTCTTCAAAGGGCACATCTGATCATCACATAGTGAAAGTTGATGTTGTAAAAGTAAATTGCGATCCTGAAGAAAATGTGACAAAGAAGCAGCGACATCCAAGACAAAAAGTTGTGAGAATAACACAGTCAAATCCATCAAAAGGTATATGGAAAACGAACAATGGACACAATAAATGA 1488 0.4409 MLKLFNKSLRRLCSNLRWPLRRRSRSKIVIKRFGKPNPKPPNDTKLESNINGLALVHPNGQLASPESQKPVRIATFNAALFSMAPALPKAEKGATFDDENGGVLKPRRPFDGNLRAKLANDRPKSILKQSPLHPNSMNSPDNLTKQQKFTKSKLRVSINLPDNEISLLRNRQLSFSEYEKEGSSNVSKRKVPMRPSVSFSGYSGNGVDAQSYRSSRTVLDVLRELDADILALQDVKAEEENGMKPLSDLAATLGMNYVFAESWAPEYGNAILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFYCTHLDHLDENWRMKQINAIIQCNDEPHILAGGLNSLDETDYSQERWTDIVKYYEEMGKPTPKVEVMRYLKSKHYTDAKEFAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPFKFVPGSYLVLSSKGTSDHHIVKVDVVKVNCDPEENVTKKQRHPRQKVVRITQSNPSKGIWKTNNGHNK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3322 495 FunFam Endonuclease/exonuclease/phosphatase family protein 204 455 - -
Dere01g3322 495 SUPERFAMILY DNase I-like 215 452 IPR036691 -
Dere01g3322 495 Gene3D Endonuclease/exonuclease/phosphatase 198 454 IPR036691 -
Dere01g3322 495 MobiDBLite consensus disorder prediction 92 150 - -
Dere01g3322 495 Pfam Endonuclease/Exonuclease/phosphatase family 209 445 IPR005135 GO:0003824
Dere01g3322 495 MobiDBLite consensus disorder prediction 129 150 - -
Dere01g3322 495 MobiDBLite consensus disorder prediction 92 122 - -
Dere01g3322 495 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 68 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3322 Dere-ChrDere01 47945821 47948830 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3322 01 47945821 47948830 Dere01g3322 01 47945821 47948830 ECH