Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3316 ATGTACATGTGGACCGTCCAAATTAAGAAGGCCAAGACAATTACAATTCCAGATGCCAAAAGCATTAATAATTTGACAGCAACAGACCAGAATCATGTTCTTGACTATATTTATCTAAAATGTGGTACACTTCACATTTGCTCCGTCTTGAATTCTACCATTACTTTTCCTCCCCCTCAATTTCTTTTCACTTCTCTTCTCATCCAGTTTCCAAACATATTCTCAGTTGGTGTACCATCTTTTGTGTGCTTTTTGAATAAAGTTGATGTTGTTGATGATCCAGAGTTAGAGCTGGTTGAAATGGTGCTCTGTGGTTGGGTGTTTCTGTGTGTTCATTATGGTGGTCCTCTTAAAACAACGGCAACTGGTGTTGAGATGTTCAAGAAGATATCGGATCAGGGACAAGCCGGTGACAACGTTGGTCTTCTTCTACGTGGTCTAAAACGGGAAGATATTCAACGTGGTCAGAAGTTTGAGGCAGAAATTTATGAACTCACAAAGGATGAAAGTGGGCGACACACTGCCTTCTCAAACTATAGGCCTCAGTTTTACATGAGGACTGCTGATATCACTGGAAAAGTTGAATTGCCTGAAAATGTTAAAATGGTTATGCCCGGGGATAACGTTACTGCAGTTTTTGAACTGATTTCACCTGTTCCACTTGAAGCTGGACAAAGATTTGCCTCGAGAGAAGGAGGCAGAACAGTTGGGGCAGGTGTGGTGTCAAAAGTACTGAGCTAA 741 0.413 MYMWTVQIKKAKTITIPDAKSINNLTATDQNHVLDYIYLKCGTLHICSVLNSTITFPPPQFLFTSLLIQFPNIFSVGVPSFVCFLNKVDVVDDPELELVEMVLCGWVFLCVHYGGPLKTTATGVEMFKKISDQGQAGDNVGLLLRGLKREDIQRGQKFEAEIYELTKDESGRHTAFSNYRPQFYMRTADITGKVELPENVKMVMPGDNVTAVFELISPVPLEAGQRFASREGGRTVGAGVVSKVLS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3316 246 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 156 245 IPR009001 -
Dere01g3316 246 Gene3D Translation factors 158 246 - -
Dere01g3316 246 CDD EFTU_III 157 241 - -
Dere01g3316 246 SUPERFAMILY Translation proteins 111 156 IPR009000 -
Dere01g3316 246 Pfam Elongation factor Tu C-terminal domain 152 244 IPR004160 -
Dere01g3316 246 Gene3D Translation factors 109 157 - -
Dere01g3316 246 PANTHER ELONGATION FACTOR TU-RELATED 114 245 - -
Dere01g3316 246 FunFam Elongation factor TU mitochondrial1 155 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3316 Dere-ChrDere01 47902834 47907333 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3316 01 47902834 47907333 Dere01g3316 01 47902834 47907333 ECH