Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere01g3312 | ATGTTGTTCTTCTCCTACTTCAAGGACTTGGTAGGCAGAGAAGTAACGGTGGAGCTCAAGAACGATTTGGCGATCAGAGGAACATTGCACTCAGTGGACCAGTACCTTAATATCAAGCTCGAGAACACTCGCGTCGTCGATCAGGACAAATACCCTCACATGCTTTCTGTAAGGAACTGCTTCATCAGGGGGTCGGTGGTGAGATATGTGCAATTGCCTCCGGAAGGAGTAGACATTGAACTTTTGCATGATGCGACAAGGAGAGAAGCTCGTGGTGGCTGA | 282 | 0.4858 | MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG | 93 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere01g3312 | 93 | FunFam | U6 snRNA-associated Sm-like protein LSm2 | 1 | 93 | - | - | |
| Dere01g3312 | 93 | ProSiteProfiles | Sm domain profile. | 2 | 76 | IPR047575 | GO:0003723 | |
| Dere01g3312 | 93 | SUPERFAMILY | Sm-like ribonucleoproteins | 3 | 92 | IPR010920 | - | |
| Dere01g3312 | 93 | PIRSF | Lsm2 | 1 | 93 | IPR016654 | GO:0006397 | |
| Dere01g3312 | 93 | Gene3D | - | 1 | 92 | - | - | |
| Dere01g3312 | 93 | PANTHER | SNRNP CORE PROTEIN FAMILY MEMBER | 1 | 91 | IPR016654 | GO:0006397 | |
| Dere01g3312 | 93 | SMART | Sm3 | 5 | 72 | IPR001163 | - | |
| Dere01g3312 | 93 | CDD | LSm2 | 2 | 90 | IPR016654 | GO:0006397 | |
| Dere01g3312 | 93 | Pfam | LSM domain | 7 | 71 | IPR001163 | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dere01g3312 | 01 | 47870846 | 47878318 | Dere01g3312 | 01 | 47870846 | 47878318 | ECH |