Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3309 ATGAGTGCAAACCGGCGACTCCGACCGAATCCTCCCAGTGAGGGATCTGAGTCCGGCGACTCGGGCATACTCAACGAGCGCGTACTCGTTCTCATCTTCGAGTCCATCAAGTGGGACCTACACACCCTCTGCATCACCGCGTCGTTGAACCAGAAGCTCCGAGCGGTGGCCAAGCGGCTCCTCTGGCGCGAGATGTGCGTATACCGCGCCCCGCGCATGGTAGCTGCATTGGCCAAGGGTGCGCCGAATGGAAGAATTGGAGGTGGGTGGGACGCGCTCGCGAAGCTCATGTTCTATTGCTGCGGGTGCCAGTCCACCAGACATTTCCGGGTGGGTCAACCAGTGGCGGGTCACTTAGTGAAAGCCTCCAGATTTTCGAAGACATCGGGTCGGAGCTTCTTGACGAAGAAATGCAGAGGAGACTTGTTGTATGTCAGCGATCCCTGCGAGCACCGGATGGGGGACATGGAAGATGATTTAGGAGTATATAGAGGGGTATTTCAGGGATTTATCAGATCGAGGACTAGAGCGTGCTTGATCCGACGGCAGGTGGATCTGGAGCAAGTAGTGAGGTGTCCATATTGTGGGGCCCGTGTTTGGAGCATGACCAAGGCCGGACTAATTCCAAAGAGCGCGGCCAGGAGGCTCGGCTCGCGTGATGGGGGGCTGGAGTATTTCGTGTGTGTGAATGGGCACTTGCATGGAACTTGTTGGCTAGTGCCGTTGTCGTCGGATGAGAATGATCTCGACGTGGACGACGAAGACAAAGACGACGACGCAAGCGAGAACAAGGGTCAGGATGGTGTCCGTAGGATTGACCCAGCCGATCGGACGGCTACGAGTGGAAGTATGAGCTCGATTGGGGAGGAAATAGTGGCAGATGGGCCTGCATAGGCCTGTACAGCCATTTGTGACAGTGATTATGGTTCAAGTTCTCTGTTCCCAGGTCGAGTATACAGTGGAGGTAGGAAGAGTAGTCCGATGTGGATCAAGTGCTTCGAAGGAAATAAAATGGCGAGTCTCTCGGATATTGGCCTTTCAGCAGCTATTAATCTCTTGTCTGCATTTGCCTTCCTTGTGGCGTTTGCAATGTTGCGACTTCAACCGATTAATGATCGGGTTTACTTTCCAAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACTACTTCTAGAAACTTGGTGAACAGATTTGTTAATCTGGACGTCACAACGTACATAAAGTTTCTGAGCTGGATGCCTGCAGCATTGAGGATGCCGCAACCAGAGCTAATTGATCATGCAGGGCTTGACTCTGCTGTGTATATTCGGATTTATCTTCTTGGCTTGAAGATATTCGCCCCTGTTACCGTACTCACTTTAATAGTTTTGATTCCGGTTAATTGGATGGGGAAAACATTGGACGGTACTAAAGATTTGAAGTTTAGCGATATTGACAAGATTTCAATATCCAACGTTCCATCTGGATCAAAAATATTTTGGGTGCATAGCGGCATGTCATATGTCTTCACATTTTGGACGTGCTATTGTCTTTTCGAAGAATACAAAATTATAACGGAATTGAGATTGAGATTTTTGGCATCTGAAAATCGTCGTCCAGACCAATTTACTGTCCTGGTGACGAATGTTCCCCCAGATCCTGATGAGACAGTCAGTGAGCATATCGAACATTTCTTTTGTGTGAATCATCCTGATCACTATCTGTTGCACAATGTTGTCTATAATGCGAACAAGCTTGCATCAATAGTTGCACAGAAGAAGAAATTGCAAAATTGGCATATTTACTATCAAAATAAATTTGAAAGAAGTCGTTCGCAATCACAAAGGCCAACTACACGGACAGGTCTTCTAGGTCTCTGGGGAGATAAAGTCGATGCTATTGATCATTACGCAGCGGAGATTGCTAGGCTAAGTGAAGAAGAAGAAGCAGAAAGAGCGAGGGTTTCAATTGATCCTGAGGCTATAGTTCCTGCAGCGTTTGTTTCGTTTAAAACTCGATGGGGGGCTGCTGTCTGTGCTCAAACTCAACAAACTAGTAATCCTACTATTTGGCTTACAGATTGGGCTCCTGAGCCTTGGGATGTCTGTTGGGAAAATCTTGCGATTCCATATGTTGAACTCACTATTCGAAAAGTGCTCATGAATGTTGCTCAATTTTTCCTAATTTTCTTCTTTATGATACCGATAGCATTCGTCCAAACTCTGGCCAACATCGAGTCGATTGAGAAGAGTCTTCCTTTCCTAAGGCCACTGTTGGAAAAGAATTCTGTCAAGTCTTTTGTACAGGGATTTCTACCAGGTCTAACATTAAAGATATTTCTTATTATGGTTCCAACAATTCTCATGATCATGTCCAAAATAGAAGGTCATAGATCGTTTTCATCTTTGGAGAGGAGATCAGCTGCAAAATATTACCTTTTCATTCTCGTCAATGTGTTCCTTGGGAGCATTGTAGCAGGAACGGCATTTCAACAACTTGAAGAGTTTATTAAAGGGGACTCAGCAGAGTTCGCAAAAACGGCTGGCAGTACAGTCCCCATGAAAGCCACATTCTACATCACATATATAATGGTGGATGGTTGGTCTGGAATAGCTGCAGAGATCCTCAGGATATCTCCGCTTGTTATATTCCACCTGAAGAACATGTTCTTGGTGAAGACAGAGCAAGATAGAGAGCGGGCTATGAATCCTGGAAGCTTGAACTTCGCCGTAGATGAACCTCGCCTACAGTTGTATTTTATGCTGGGCCATGTCTATTCTCCCATAACGCCTGTGCTTCTCCCTTTTATTGTCATCTTCTTTGCCTTTTCCTACCTGGTCTTTCGGCATCAGATTATCAATGTGTACCATCAAAGATATGAGAGCGCAGCAGCATTTTGGCCAGATGTCCATCGTCGAGTACTTATCGGCTTGGTTATATCTCAAATTCTTCTGATGGGATTGTTAAGCTCAAGAGATGCTAGCAAGGCAACGATCGTGCTACTGGCACAACCTGTTTTTACAATCTGGTTTTATTTATATTGCAAAGGGCGCTTTGAATCTGCATTCGTAAAATTTCCGTTAGAGGATGCAATGGTGAAGGATACACTCGAAAAGGCCATTGAACCGAATCTGAACATGAGACTGTATCTTCAGGATGCTTATATACACCCAGATTTCAAGGGCGGTGATCTGGACAAACCAGAAGTGATTGATGATGAAGAGAACAATCCACTCATTCAAACCAAGAGAGCTCGCAGGAGTAGCATGCAGCCATCTGAAGTCGCCAGTTCCGAGGCTTCGGCTACGCCTACGGGTAACATCACAAGAAGTACTAGTGTCGGGGAACGATTTGCGCGAAAAATAGCTCTTGATTTGTTCATGCAATGCTCTAATTTCTGTTATTGTAAGCCAGAAACTTCCCAAATCTATTCACGATTTGAAACCTCTGTCCCGGCTTTTAAAGATCTTATGCTTCTTTATCGTTCAGATACATCCTTCTCAAGCACAAAGATGGAAAATCTTCTGCTATCACTTTCAGTACAGGAATGCTGTAGAAAATCAAAGGCCGTTGAACAATCTCAGATGTTACCCTCTGGTCAGTGCCAATTTGGAAACAAAATCTTGTTTTGA 3612 0.456 MSANRRLRPNPPSEGSESGDSGILNERVLVLIFESIKWDLHTLCITASLNQKLRAVAKRLLWREMCVYRAPRMVAALAKGAPNGRIGGGWDALAKLMFYCCGCQSTRHFRVGQPVAGHLVKASRFSKTSGRSFLTKKCRGDLLYVSDPCEHRMGDMEDDLGVYRGVFQGFIRSRTRACLIRRQVDLEQVVRCPYCGARVWSMTKAGLIPKSAARRLGSRDGGLEYFVCVNGHLHGTCWLVPLSSDENDLDVDDEDKDDDASENKGQDGVRRIDPADRTATSGSMSSIGEEIVADGPAXACTAICDSDYGSSSLFPGRVYSGGRKSSPMWIKCFEGNKMASLSDIGLSAAINLLSAFAFLVAFAMLRLQPINDRVYFPKWYLKGIRGSPTTSRNLVNRFVNLDVTTYIKFLSWMPAALRMPQPELIDHAGLDSAVYIRIYLLGLKIFAPVTVLTLIVLIPVNWMGKTLDGTKDLKFSDIDKISISNVPSGSKIFWVHSGMSYVFTFWTCYCLFEEYKIITELRLRFLASENRRPDQFTVLVTNVPPDPDETVSEHIEHFFCVNHPDHYLLHNVVYNANKLASIVAQKKKLQNWHIYYQNKFERSRSQSQRPTTRTGLLGLWGDKVDAIDHYAAEIARLSEEEEAERARVSIDPEAIVPAAFVSFKTRWGAAVCAQTQQTSNPTIWLTDWAPEPWDVCWENLAIPYVELTIRKVLMNVAQFFLIFFFMIPIAFVQTLANIESIEKSLPFLRPLLEKNSVKSFVQGFLPGLTLKIFLIMVPTILMIMSKIEGHRSFSSLERRSAAKYYLFILVNVFLGSIVAGTAFQQLEEFIKGDSAEFAKTAGSTVPMKATFYITYIMVDGWSGIAAEILRISPLVIFHLKNMFLVKTEQDRERAMNPGSLNFAVDEPRLQLYFMLGHVYSPITPVLLPFIVIFFAFSYLVFRHQIINVYHQRYESAAAFWPDVHRRVLIGLVISQILLMGLLSSRDASKATIVLLAQPVFTIWFYLYCKGRFESAFVKFPLEDAMVKDTLEKAIEPNLNMRLYLQDAYIHPDFKGGDLDKPEVIDDEENNPLIQTKRARRSSMQPSEVASSEASATPTGNITRSTSVGERFARKIALDLFMQCSNFCYCKPETSQIYSRFETSVPAFKDLMLLYRSDTSFSSTKMENLLLSLSVQECCRKSKAVEQSQMLPSGQCQFGNKILF 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3309 1203 Pfam Cytosolic domain of 10TM putative phosphate transporter 535 699 IPR027815 -
Dere01g3309 1203 MobiDBLite consensus disorder prediction 1 20 - -
Dere01g3309 1203 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 342 1077 IPR045122 GO:0005227
Dere01g3309 1203 MobiDBLite consensus disorder prediction 248 283 - -
Dere01g3309 1203 Coils Coil 627 647 - -
Dere01g3309 1203 MobiDBLite consensus disorder prediction 1075 1102 - -
Dere01g3309 1203 Pfam Calcium-dependent channel, 7TM region, putative phosphate 710 982 IPR003864 GO:0016020
Dere01g3309 1203 Pfam Late exocytosis, associated with Golgi transport 344 514 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3309 Dere-ChrDere01 47820934 47831912 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3309 01 47820934 47831912 Dere01g3309 01 47820934 47831912 ECH