Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3308 ATGGCGCCTAGTCGCAGAAAGGGCGCTAGCAAAGCAGCCGCGGCTGCCGCTGCTCGCCGCCAATGGAGGGTCGGCGATCTCGTCCTTGCTAAGCTAAAAGGCTTCCCTGCTTGGCCTGCCACGGTAAGTGAACCGAAGAAATGGGGTTACTCCACTGACTGGAAGAAAGTACTTGTTTACTTTTTTGGAACCCAACAGATAGCTTTCTGCAATCCTGCTGATGTTGAAGCATTTACTGAAGAAAAGAAACAATCTCTTCTGGTCAAACGTCAGGGAAAGGGTGCTGACTTTGTTCGTGCAGTACAAGAGATTATTGATTGCTATGAAAAATTAAAAGGGACACAAGTTGGCGAAACCAATTCTGGCAGTGAAGTTTCTGGTGTAAATGTTGCGATTCCTGTTGAGTCATCAACTGCGTTATCTACCAACTTAGGATTAAAGGATGAGATAAAAGCTCTGGAGTTGATACATAATTCGCAAATAAAACCTTCAAATTCTTTCACTGATTGGCCTGAACCAATATGTGCAGCTGAGGAAGCCTTAGTTGCTGTGTCAAAGGATGAATCTTCTAGTAAAGAAGCTGCTGCACCAAAGGATGAATCTTCTAGTAAAGAGGCTGCTGCACCAAAGGATGTATGTTCTAGTGAAGAGGCTTCATTAAAGGAGCCTATTGATAATGCTGCTGCTTCTGTAAAGTCACCTTTGCCAGTTACTTACTCTTCTCGAAAAAAATCTGTTGACTTGCGTCCACAGGGTAATATCACACAGAAAAGTGCACCAATTCGAAAGTCTAGAAGCTCATCACGGATTCAAAGCTATGTGATGCCTTGTAGTGATGGTGGAAAAAGAGCAGGTGATGTATCGGCTAATGCAGTTAGTGTGAGAAGAAATAAACACTTCAGGAAATCACCTGATATTTCTGGCTGTGATGATGTTAATACATCTGCTTTTACTTCAAATGGTAGCATCGAAGACAATCGTTCTGAAATTCTTACAATTGATTCTGATCCCTTTAGCCAGAATGAGGGCAGTACCATGGACTCAAATTGTAAACTTGAACTCTCTGAGACCATTGAGTGTCCAGAAGGTGAATTTGAGTTGAACAAAGGATTTGATCTTGAAATAAAGACTCTAGTCAAGAAGAAAAAAAGAAGGCCAAACAGGAAGCGGGCATCTAACGATTCTGCCAAACAAAGCACTACGCCAGATGAGGAGGCTGGTGTACTAAATACCAGCCTAAGTTTGCAGAATGTTTTTGGTAATTCAAAAGATAGATGCTCCAAGCAAGATGGTGATGCGCACCTGCCACTTTTGAAACGTGCCAGGGTCAGAATGGGTAAGTCATCAGCACCAGACATGGAACACAATAGCATTGTACAATCTCAAGATAAAAGATCTACTGATAACAGTATCAACTCATTTCAGCATATCTTTATTTCCTCAACTTCTGAGAATGGTAGTGCTGCTGAGGGGGATTCTGTTTTGAATGTATCAATGAATAATGTTTCTCCAAAAAGTTTAGCCCCAGGTTCTGAAAATGGTTCTCAGATTTGTAAAATTAAAGGCCAACCTTTTGGCTGTTCTGTGGATGGTGAAGCTGTTTTACCTCCATCTAAACGCCTCCATCGTGCATTAGAAGCCATGTCAGCTAATGCTTTTGAAGATGGTGATGGTCAAGATCATGCAGAACTGTCACCCCCCATAATGGCGTCAAATGGTGGATGCTGTACATATTCCACCAAGAGATGTCCTTGTATAGCCATTAATAGTCAAGGAGGGAATGCTTTGGAACTGCAAAGGATGGACACTTGTGGCACTGATTCATGTCATTTTAAAGCATGTAGTCCAGTAATTTGTAATTCTATAGAGAACAAATCATCTATAGAGATGGATAGTCAAATGATTGAGTTTCCAAACCATGAAATCTGCAAGGATATCCTACCAGGTGCCAAAGCCCAAGAAGGTGGCAAAGATCTTACTGGCTCTGTGGCTCATCACACTGATGGATCTGACTCCCAAATTCATTTACATGGAAATTTATCTCCTAGTCTTGACACAAAATGTTGTGAAGTTGGAAGCAGTCAAGATTCACTTGGTCCGTTGTTACTGCCAAATGATGAAGGCAACATCAGAGCAGTTGACCATTCAAATAAAGCATCTGATACATCAGAACATATTGAGGTATGTCTTGATCCTACATCAGATGCCAATGAAAGTGGTGGATTTTCTCCCCAAAATATTACTAATGTGCCTCAGAATGAAGTCGCTGTGGTTGCTGAGTGCTTGAAGCCGGCTTTTGGTGATAGCAGCAAAGCGAATGACATGTGTGAGGTTGTAAAAGAGGTAAAATGTAAAGGACCGAAGGAGGATATAAATTCTGTTTCAATTTCTGATGACTGTTTTGGTGAAAAGGATATTTTGGGCCTTCAGTCAAGTCCATCTTTGACGGATGGGGGAGATTGCCCTCCTCAAGGATCCCCACCAAATACGTCACTTTGCAATGTTTCTACTTCAGACAGTAGCAATATCCTTCACAATAATGGCAGTTGTAGCCCTGATGTGCATTTACACCAGATGCAAACTTTTTCTGGTGCTACTGTTGATGGAAGGAAAGATGGATCTTCAGCAACTCAACGATTAAAGGGCAAGTGCACCGAAGCAGGACATGCTGCGCTCTTGTACTTTGAAGCAATGCTTGGGACGTTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACGCGCATAGCTATTGACTGTGCCAAGTTTGGCATTGCAGCTAAGGTGGTGGAGATACTTGCCCATAGTCTGGAAACTGAGTCAAGCCTGCATCGACGGGTGGATTTGTTTTTTCTGGTCGACTCTATCACACAGTGTTCTCGAGGTTTAAAAGGTGATGTTGGTGGAGTATATCCATCTGCTATCCAAGCAGTTCTGCCGCGCCTATTGTCAGCTGCTGCTCCTGCTGGAAACACTGCGCATGAAAATCGTAGACAGTGTCTTAAGGTTTTAAGATTGTGGTTGGAGAGGAGAATTCTGCCTGAATCTGTTATTCGTCATCATATTCGGGATCTGGATGCCTATAATGTGTCAGCTTCTGCAGGTGCCTTCTCACGAAGATCTTTACGAACAGAAAGGGCTTTAGATGACCCTGTTAGAGAAATGGAGGGCATGCTTGTGGATGAATATGGAAGCAACTCAAGTTTTCAGCTGCCTGGATTTTGCATGCCCCGAATGCTTAAATATGAAGATGAAGGGAGTGATTCTGATGGAGGAAACTTTGAGGCTGTCACTCCCGAGCATAATTCTGAAACACATGAAGTGTGTGAAACGACCCCTGCACTTGAAAAACATAGGCATATCTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTTGTGATGTTGAATTGAATTCAAATTTTACTGTCAATGGAGGAAATGCAGATGCGCAACAGTTGCCAAATAATCCAATTGAGAAAACTAATCCTGTGTCCTTTGTCCCTCCTTTACCTCTGGATATACCTCCATCGTCCCCACCACCCCCATCATCCTCTCCTCCCCCACCTCCACCCCCACCGCCACCCCCACCTCCTTCCTTGCACCTGATGCCAGCTATCTCTCATCCATATGGCGCCGGAGTTGTTTCAAAACTTCATAGAGATGCACAGAATCTGCAAGATAACTCACTCCCCTCAATGACTGAGCCTTTGGCTGCACCAAGGAATAGCCAACCTTTATGTGAGGGAGTGCACTATCGAGTTTCAGAATGTAGGGACATGCCAATGCAGATACCTGAGTCTTCTTCCTCTTGCAGCAATTTCCCTGTACTCCCACCTGACAATTTTCGGTATTTTGATGGTGTTACTATGCATAATAAAGGTTATCCTTTACGTCCACCTCACCAAGTGCCCTCCAATCAGTTTTCTTTTGTTCATGGGGATCAGCATGTGAAGCTGCGGAGGGAGGTTCCACCCCCTTCTTACTCCAATAGGCACCACTCTGTACAAAACATGGAGAGAGAGAACTTCCGCAATAATCATGACAGAATAAGACCACCTCCATATGACTTCCGAGAGAGATGGAGAGCTCCTGCACCATATTCTGGTCCTCGTTATCAGGACAAAGGTGGTCCTGGCCCTTATGGTTGTCATCCATGTGAATCAACTAGATTTCCAGACCATGGGTGGAGATTCCCTCCCAGGTCAATGCATCACAGGAATTCCATGCCTTTTAGACCACCCTTTGAAGATGCAATTCCAGTGGCAAGTAGAGGTCCAAGCTTCTGGCGGCCTAGATGA 4311 0.4384 MAPSRRKGASKAAAAAAARRQWRVGDLVLAKLKGFPAWPATVSEPKKWGYSTDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLLVKRQGKGADFVRAVQEIIDCYEKLKGTQVGETNSGSEVSGVNVAIPVESSTALSTNLGLKDEIKALELIHNSQIKPSNSFTDWPEPICAAEEALVAVSKDESSSKEAAAPKDESSSKEAAAPKDVCSSEEASLKEPIDNAAASVKSPLPVTYSSRKKSVDLRPQGNITQKSAPIRKSRSSSRIQSYVMPCSDGGKRAGDVSANAVSVRRNKHFRKSPDISGCDDVNTSAFTSNGSIEDNRSEILTIDSDPFSQNEGSTMDSNCKLELSETIECPEGEFELNKGFDLEIKTLVKKKKRRPNRKRASNDSAKQSTTPDEEAGVLNTSLSLQNVFGNSKDRCSKQDGDAHLPLLKRARVRMGKSSAPDMEHNSIVQSQDKRSTDNSINSFQHIFISSTSENGSAAEGDSVLNVSMNNVSPKSLAPGSENGSQICKIKGQPFGCSVDGEAVLPPSKRLHRALEAMSANAFEDGDGQDHAELSPPIMASNGGCCTYSTKRCPCIAINSQGGNALELQRMDTCGTDSCHFKACSPVICNSIENKSSIEMDSQMIEFPNHEICKDILPGAKAQEGGKDLTGSVAHHTDGSDSQIHLHGNLSPSLDTKCCEVGSSQDSLGPLLLPNDEGNIRAVDHSNKASDTSEHIEVCLDPTSDANESGGFSPQNITNVPQNEVAVVAECLKPAFGDSSKANDMCEVVKEVKCKGPKEDINSVSISDDCFGEKDILGLQSSPSLTDGGDCPPQGSPPNTSLCNVSTSDSSNILHNNGSCSPDVHLHQMQTFSGATVDGRKDGSSATQRLKGKCTEAGHAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGIAAKVVEILAHSLETESSLHRRVDLFFLVDSITQCSRGLKGDVGGVYPSAIQAVLPRLLSAAAPAGNTAHENRRQCLKVLRLWLERRILPESVIRHHIRDLDAYNVSASAGAFSRRSLRTERALDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKYEDEGSDSDGGNFEAVTPEHNSETHEVCETTPALEKHRHILEDVDGELEMEDVAPSCDVELNSNFTVNGGNADAQQLPNNPIEKTNPVSFVPPLPLDIPPSSPPPPSSSPPPPPPPPPPPPPSLHLMPAISHPYGAGVVSKLHRDAQNLQDNSLPSMTEPLAAPRNSQPLCEGVHYRVSECRDMPMQIPESSSSCSNFPVLPPDNFRYFDGVTMHNKGYPLRPPHQVPSNQFSFVHGDQHVKLRREVPPPSYSNRHHSVQNMERENFRNNHDRIRPPPYDFRERWRAPAPYSGPRYQDKGGPGPYGCHPCESTRFPDHGWRFPPRSMHHRNSMPFRPPFEDAIPVASRGPSFWRPR 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3308 1436 MobiDBLite consensus disorder prediction 186 227 - -
Dere01g3308 1436 SMART PWWP_4 22 79 IPR000313 -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 241 274 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 191 206 - -
Dere01g3308 1436 Pfam CID domain 895 1018 IPR006569 -
Dere01g3308 1436 SUPERFAMILY Tudor/PWWP/MBT 19 114 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 1148 1166 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 393 409 - -
Dere01g3308 1436 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 241 285 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 453 467 - -
Dere01g3308 1436 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1131 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 381 409 - -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 446 467 - -
Dere01g3308 1436 Gene3D - 3 107 - -
Dere01g3308 1436 FunFam Enhancer of ag-4 2 889 1030 - -
Dere01g3308 1436 ProSiteProfiles CID domain profile. 887 1028 IPR006569 -
Dere01g3308 1436 SMART 558neu5 894 1025 IPR006569 -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 1148 1210 - -
Dere01g3308 1436 Pfam PWWP domain 25 108 IPR000313 -
Dere01g3308 1436 Gene3D - 893 1031 IPR008942 -
Dere01g3308 1436 MobiDBLite consensus disorder prediction 1172 1207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3308 Dere-ChrDere01 47792864 47807867 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3308 01 47792864 47807867 Dere02g0655 02 6115805 6116389 CCT
Dere01g3308 01 47792864 47807867 Dere01g3308 01 47792864 47807867 ECH