Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3284 ATGGAAGACATTATGACGAAGGTTGTTTCTCCTAAAGCTGCAGCAATAGCGATTGCTATGTTTTGCTTGTGGACTGTTGCTGAGAGCGTTCCTGACACCACCATCTCAAACGTTCTCTGCAACGTAGGTGAGTACACCTCAGGCGATCCTTTTGAGGTCAGCTTAGCCTATGTGCTTCAAGAATTGGACACGGTGGCTCCGACCCACAAAAATTACGATTACTACAACATTTCTCCTTATCCTAATGCCTTTGCCTATGCACATGCTGCTTGCAACACGAATCTGACATCCTCTGACTGCATAACCTGTCTCGCTGCTGCCAAAACGGCCTTGCTTGGTACGTGTCAGAGACGGATTGGGGCTCGTTCACAGCTCCATGATTGTACCATCAGGTATGAGCAATACCCATTTGATGATTAG 420 0.4714 MEDIMTKVVSPKAAAIAIAMFCLWTVAESVPDTTISNVLCNVGEYTSGDPFEVSLAYVLQELDTVAPTHKNYDYYNISPYPNAFAYAHAACNTNLTSSDCITCLAAAKTALLGTCQRRIGARSQLHDCTIRYEQYPFDD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3284 139 Gene3D - 32 137 IPR038408 -
Dere01g3284 139 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 15 137 - -
Dere01g3284 139 FunFam Antifungal protein ginkbilobin-2 32 137 - -
Dere01g3284 139 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Dere01g3284 139 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3284 Dere-ChrDere01 47632828 47633247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3284 5 139 Receptor kinase-like Gene Family AT5G40380 27.737 7.41e-07 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3284 01 47632828 47633247 Dere01g3284 01 47632828 47633247 ECH