Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3274 ATGGGAAGTCTAGCCATGGCAGCTTCTCGGTTCAGCTCAAATCTCTTCGATCCACAAAGCTTTCGAGCTGAACCCAAGATATTTCGAGGCAGACATGCTGAGCAAATCCAATTTTACTGTATAAAATGCCATAAAACTGGGGTTTCTGCATACGTTAGAAGGCATTCCCCATTGCCGAACAGGTCTATGTTCACTAAAGTAAACAGGAGGCTTTCTGTCAACTTCTCGGATCAGCTTCGAAGTGACTATCTACATGTTGAACCTCCAAATATCCAGCATTCAAATCAGGAGATTGTTCCACCAACCCAAAGTGATAGGGCAGAGATCCTTGCATCTCCTAATGCCAATAGCTCCAGAACCCAAAAGTTCAGTCCCCAAAAGTATAAGAATAGGTTTCTAAATTTTGTCCGTCTGAGTTCTGTCCTTAATGATGTTGCTGAATCATTTTTCAAAAGTGAGATACGGAGGAGGTTATTCGTGACTTCTGTACTGATTGTAATCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGATTTGACAGAAGGTTGATACCACAAGACTACCTGAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTTCACCTCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATAATTGCATCCATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCTCTAGTGAAATTGCGAAAGGAAGGTCTAGATGGACATGAGAAGATAAAGAGTTACATATGGTGGATGACACTTGGCTTTGCAATTTTGGAAGCTTTAATACTTGCTTGTTACTCACTTCCATATTCAATTTATGCTGCCAGTCAAAGGGTCAAGCATGTGATGGTGACAACTCTTTTGTTGGTCTGTGGTGCAATGACTATAACATGGATATGTGATACCATCTCAGAATCTGGTTTTGGTCAAGGTTCATCACTTATTATTTGTGTGGGGATATTGACGGGCTATATGGAGACATTACACAAAATGCTGACTCAGCTCTCAGTGAGTGCTGTGAGCTGGTGGCCGTATGTACTTGCAGTGTTGGGTCTATTCACAATAGTCACTATGTGGGCAGTCGTAGTAACTGAAGGTTGCAGGAAAGTGAAGCTTCAATACTATGGTTTTAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATCAATCCGTCAGGAATGCAACCTGTTCTTACCACCACTTACCTCTTGGCATTTCCAAGTATTCTTGCAAGTCTGCTTAATTCACGTTTCTGGGAGCACGTCAAGGAGATATTGAACCCTGAAACATCTATTGGTGCTGAGCCTTGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTATTCAACATATTTGATATTGCCAACTTGCCCAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCGAGGATACCAAACATAAAGCCTGGGAAGGCAACAATAGAATACCTTTCGAAAGTTCAGGCATCCACTCGATTTTGGGGGGGGCTATTGTTAAGTGTACTAGCCACTACTTCAAGTATTCTTGATCATTATTTACGACGTACTAATGCTGGATTTGCAATTGGGTTTACTTCAGTTTTGATTATTGTTGGTTCCATTATTGAGCTGAGAAGATCATATCAAGCCTATAATGTAATGCCAAGTTTAAGCAAGGCTCTGAGACGGTATGGTGTATAG 1734 0.4135 MGSLAMAASRFSSNLFDPQSFRAEPKIFRGRHAEQIQFYCIKCHKTGVSAYVRRHSPLPNRSMFTKVNRRLSVNFSDQLRSDYLHVEPPNIQHSNQEIVPPTQSDRAEILASPNANSSRTQKFSPQKYKNRFLNFVRLSSVLNDVAESFFKSEIRRRLFVTSVLIVISRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDFTSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMTLGFAILEALILACYSLPYSIYAASQRVKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASLLNSRFWEHVKEILNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3274 577 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 148 565 IPR002208 GO:0015031|GO:0016020
Dere01g3274 577 FunFam Preprotein translocase subunit SCY2, chloroplastic 142 567 - -
Dere01g3274 577 Pfam SecY 209 555 IPR002208 GO:0015031|GO:0016020
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 453 475 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 208 228 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 158 176 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 249 272 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 541 559 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 284 309 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 408 427 - -
Dere01g3274 577 PRINTS Preprotein translocase SecY subunit signature 310 333 - -
Dere01g3274 577 SUPERFAMILY Preprotein translocase SecY subunit 138 562 IPR023201 -
Dere01g3274 577 Gene3D SecY subunit domain 141 567 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3274 42 577 Miscellaneous Gene Families AT2G31530 73.519 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3274 01 47510213 47518032 Dere01g3274 01 47510213 47518032 ECH