Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3254 ATGTCTTCTCACTTCTCTAACTGCTTTCTCTGTTCTTCTTCCAACCATCTCTCTTCTCTTCCTTCTTCTTCTTCTTTCTCTTTTCCTTCCTCCTCCAAATCCTCTTTCCAGCTGGAAAGTAAAGGCATATTTCAGGGTGGTCTTCCAACGTTAAAGTGGCGCGAGATTGTGGAGGATGACATTGGCGAGGAGGAAGCTAATCAGGTTTCGGAGACCAATGAGATCAAAAAGCGACTGGAGGCTGTCAAAAGAATATTGAGCTCCATGGAAGATGGAGACATAAGCATATCTGCTTACGACACAGCATGGGTTGCTCTTGTTCAAGACGTTAATGGAGGCGGTGTCCCACAATTCCCTTCTAGTCTCGAATGGATAGTGAAAAACCAGCTTCCTGATGGTTCATGGGGTGATAAACAGCTATTCTCAGCCCACGATAGAATTATTAACACGTTAGCTTGTGTGATTGCATTAAAATCATGGAATATCTACCCTGAAAATTGTGACAAAGGACTGGCATTTTTTAGAGGAAACCTCAACAAGCTTGAGAATGAGAATGCTGAACATATGCCAATCGGCTTCGAAGTTATTTTGCCTTCCCTGCTGGATATAGCTCGAGGTTTGAACATTGAAGTACCAGATGATTCTCCAGTAGTGAAACACATATTGGCCATGAGAAAGGTGAAGCTCACAAGAATACCAAGGGAGATGATGCATAAAGTGCCCACAACACTGCTTCATAGCTTGGAGGGGATGTCAGGGTTGGATTGGAAAGAGCTTCTAAAACTGCAGTGTGAAGATGGGTCTTTCTTGTTTTCTCCGTCCGCCACTGCCTTTGCTCTTATGCAGACTAATGATCATAATTGCCTCAATTACTTGAATAAAGTAATCACCAAGTTCAATGGGGGAGTTCCAAACGTGTACCCAGTGGATTTGTTCGAACATATTTGGACCGTTGATCGATTGGAACGCCTTGGAATATCAAGATATTTCAAGCAAGAGATCAAGGACTGTGTCAACTATGTTTATAGAAATTGGACGGATAAGGGCATCTGTTGGGCGAGAAATTCAAATGTTCAAGATATTGATGATACAGCAATGGGATTCAGAATACTTAGATTACACGGCCACCAAGTTTCAGCCAATGTGTTTAAGCAATTTGAAAGAAATGGTGAATTCTTCTGCTTGGCTGGTCAATCAACAGCAGCAGTGACAGGAATGTTCAATCTTTATAGGGCTAGTCAAGTAGCATTTCCGGGGGAGAAGATTTTGGAAGATGCAAAGAAATTCTCAGCCAAATTTCTCAGAGAGAAAAGAGCAGCAAACGAGCTCATAGATAAATGGATCATAATGAAAAACTTACCTGAAGAGGTGGCATACGCATTGGATGTGCCATGGTATGCAAGCTTACCTCGAGTTGAGACAAGATTTTATATTGATCATTATGGTGGTGAGAGTGACGTCTGGATTGGCAAAACTCTTTATAGGATGAGGAATGTGAGTAATAATACTTATCTTGAGCTTGCAAAGTTAGATTACAACAATTGCCAAGAACTGCATCAAATAGAATGGCGCAGAATTCAACAGTGGTACTCAGAATGTACATTGGAAGAGTTTGGATTGAGCAGAAGATCTCTTCTGTTTGCTTATTTTGTGGCTGCTTCCAGCATATTTGAGCCCGAAAGGTTTCTAGAGCGGCTTGCATGGGCTAAAACAGCAGCCTTGCTTGAGACTATAATAAGTTATGTCAGTGATGAAGAAAAGAGGAAGGCTTTTGTTAATAAATTCAACCAATGCATCCATGGACGAGACTTCTCCATTGGCTGGAGGTTGAATGGGAACAAAACAGGGCAGGGGCTAGCAGAGATATTGGTTGGAACCATAGATCAACTCTCATGGGATACTCTTCTATCACATGGTCATGAAATTGGCCATGACATGCGTCACAGTTGGCAAAAGTGGCTGTCAAGTCGGCAAAGTGGAGGAGACAAGAGGGAAGGACAAGCAGGGCTTTTGGTGCAAATAATTAACCAAAGCGCAGGGCATTGGATATCGGAGGAACTACTGTCGAATCCCCAATACCAGCAACTACTTGAACTCACTAACACTATCTGCCACAGACTCCGATGTCACCAAATGGACAAGGCACATGAGAATGGAAGTTGCAGCACGAACAGGCACAGCATCAAAACCCCGGAAACAGAGGCAAAGATGAAAGAACTTACTCAATTGGTACTTCAAAAGTCTTCTAATGGCATTGATTCCAACATCAAGAACACTTTCCTCACAGTGGCCAAGAGTTTTCACTACAAAGCTTTCTGCGATACAAGGACTACCAACTTCCACATTGCCAAAGTTCTCTTTGAGAAAGTCATTTAA 2376 0.4238 MSSHFSNCFLCSSSNHLSSLPSSSSFSFPSSSKSSFQLESKGIFQGGLPTLKWREIVEDDIGEEEANQVSETNEIKKRLEAVKRILSSMEDGDISISAYDTAWVALVQDVNGGGVPQFPSSLEWIVKNQLPDGSWGDKQLFSAHDRIINTLACVIALKSWNIYPENCDKGLAFFRGNLNKLENENAEHMPIGFEVILPSLLDIARGLNIEVPDDSPVVKHILAMRKVKLTRIPREMMHKVPTTLLHSLEGMSGLDWKELLKLQCEDGSFLFSPSATAFALMQTNDHNCLNYLNKVITKFNGGVPNVYPVDLFEHIWTVDRLERLGISRYFKQEIKDCVNYVYRNWTDKGICWARNSNVQDIDDTAMGFRILRLHGHQVSANVFKQFERNGEFFCLAGQSTAAVTGMFNLYRASQVAFPGEKILEDAKKFSAKFLREKRAANELIDKWIIMKNLPEEVAYALDVPWYASLPRVETRFYIDHYGGESDVWIGKTLYRMRNVSNNTYLELAKLDYNNCQELHQIEWRRIQQWYSECTLEEFGLSRRSLLFAYFVAASSIFEPERFLERLAWAKTAALLETIISYVSDEEKRKAFVNKFNQCIHGRDFSIGWRLNGNKTGQGLAEILVGTIDQLSWDTLLSHGHEIGHDMRHSWQKWLSSRQSGGDKREGQAGLLVQIINQSAGHWISEELLSNPQYQQLLELTNTICHRLRCHQMDKAHENGSCSTNRHSIKTPETEAKMKELTQLVLQKSSNGIDSNIKNTFLTVAKSFHYKAFCDTRTTNFHIAKVLFEKVI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3254 791 Gene3D Farnesyl Diphosphate Synthase 515 791 IPR008949 -
Dere01g3254 791 FunFam Ent-copalyl diphosphate synthase, chloroplastic 515 791 - -
Dere01g3254 791 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 266 486 IPR008930 -
Dere01g3254 791 Gene3D - 98 310 - -
Dere01g3254 791 FunFam Ent-copalyl diphosphate synthase, chloroplastic 287 512 - -
Dere01g3254 791 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 98 281 IPR008930 -
Dere01g3254 791 FunFam Ent-copalyl diphosphate synthase 98 310 - -
Dere01g3254 791 Pfam Terpene synthase, N-terminal domain 255 461 IPR001906 GO:0010333|GO:0016829
Dere01g3254 791 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 67 495 - -
Dere01g3254 791 Gene3D - 81 513 IPR036965 GO:0010333|GO:0016829
Dere01g3254 791 SFLD Terpene Cyclase Like 1 N-term 67 495 - -
Dere01g3254 791 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 71 789 - -
Dere01g3254 791 SUPERFAMILY Terpenoid synthases 501 770 IPR008949 -
Dere01g3254 791 Pfam Terpene synthase family, metal binding domain 505 655 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3254 Dere-ChrDere01 47307172 47312233 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3254 01 47307172 47312233 Dere01g3254 01 47307172 47312233 ECH