Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3250 ATGGATTCCCCTGTGAACACCCCCTCATCAATGGCCAAGCGACCCTGTTCTTCCCAAAACCCTAGATTTCAAAACCTCAACCAGGTGGACCATCTCCTCGAATCTTTTCTCGCCCTCTCTGAATTCCCTTCTCTCTCCGTCGATCTCTCCTTGGAGAGGCTTCTCTCTTCGTTGCCCACTGACGCCGATCAGACCCTTCTCATCGATCGCGCCCTTCATATGGGATCCATGCTTCTCGACGCTGCCAAAAACTCTTCCAGAAAGCGAGCTTCCAAGCACAATTCTTTCGCCTGGCCTCTCCCTCCTGACCTTACCGTCAAAGTTTTTTCAATGCTTGATACCCAGAGTCTATGCTATGCAGCAGCTACTTGTTCATTGTTTAACAAATGTGCCAGGGATCCTTTGTGCTATGAAAATATTGATTTGACAACACTTGTTCCAAAGGTTAACAATGCAGTAGTTTCTACAATGATTCAGCGAGCTGGAAAGGCCTTGAGGTCTCTTAAGCTCGGTGTTGTCCCCCGTGCTCATGCTTCCCCTGGATCCTGTCAGCCATTGGTTTATACCATCAGAAATGCCATTGTTGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGAGAGTCATCCATTCTTAATAGATCTTGTTTAAGCCCTTTAAATGGATATGGTGGTGCTCCAGGGACTCTTTTGAGAAAGTTGCACTTGTATAATATTGAAAGAATGGATAATGCATCCCTTTGTGTGGCACTGGCAGCCTGCCCTTCTCTCCTTGATCTGGAAATTGTTGGACTTCATGTTGAGCTGAGGCAAACATTAATGTCAGTGAGTACAAACTGCCACTTGATTGAGCGTTTGTTTTTCGAGTCTTCTAAAACAGGTAGAGATGACAGTTTGAAAACGCCAACCTGCATTCCTCTTGTTCATAATTGTCCCCATCTAACTTCCTTGTCCCTTAGAGGGTTTAAGTTACATGATTGTAAAGTTCGCATACTTATTAAGGGATTTCAGAAACTGAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGAAGCTTTTTAAGAAACCTTGGAAGCAGCAATGGAGGGAATTTGCTTGAGGTCTTAATTTTAAGGGACTGCATGCATCTGAAAGAGGCAGAAGTGTCTAGACTGTTGACGGCAATTCTTGCAGGAGATTTCAAATGTCTTGTACATCTTGACATATCCAATAGGGAAGGTTTAGCATCTGAGGGTGACTGGTACCACAGGTGCTACAACTCTAGTATGATGCCTATAAAGCAGGTTTTGGAAGCGAGGCTTGATTTGTGTTTGCTGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACATTTGATGCTGAACTGAATGATGAGATGAGTTTGCCGTCACAATTGAGCAGCCATACTTCAGATGAAATAAATTGCTTTAGTACATCTGACAGCAGCTACAATAGTGATCAGGGTAGTGGCAACGAGGGTGGTCAAGATGCCAGCCATGTGATTTATGAGGAAAGCTCAGATGAGATTGACTTTCTGTAG 1557 0.4361 MDSPVNTPSSMAKRPCSSQNPRFQNLNQVDHLLESFLALSEFPSLSVDLSLERLLSSLPTDADQTLLIDRALHMGSMLLDAAKNSSRKRASKHNSFAWPLPPDLTVKVFSMLDTQSLCYAAATCSLFNKCARDPLCYENIDLTTLVPKVNNAVVSTMIQRAGKALRSLKLGVVPRAHASPGSCQPLVYTIRNAIVDVSNFSWNDKRSRQGRESSILNRSCLSPLNGYGGAPGTLLRKLHLYNIERMDNASLCVALAACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFESSKTGRDDSLKTPTCIPLVHNCPHLTSLSLRGFKLHDCKVRILIKGFQKLKYVDFSTSYSITGSFLRNLGSSNGGNLLEVLILRDCMHLKEAEVSRLLTAILAGDFKCLVHLDISNREGLASEGDWYHRCYNSSMMPIKQVLEARLDLCLLAEYPSEGSYIETFDAELNDEMSLPSQLSSHTSDEINCFSTSDSSYNSDQGSGNEGGQDASHVIYEESSDEIDFL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3250 518 MobiDBLite consensus disorder prediction 1 21 - -
Dere01g3250 518 Gene3D Ribonuclease Inhibitor 92 427 IPR032675 -
Dere01g3250 518 MobiDBLite consensus disorder prediction 485 518 - -
Dere01g3250 518 SUPERFAMILY RNI-like 232 410 - -
Dere01g3250 518 SUPERFAMILY F-box domain 87 144 IPR036047 GO:0005515
Dere01g3250 518 FunFam F-box protein isoform A 93 394 - -
Dere01g3250 518 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 99 497 - -
Dere01g3250 518 MobiDBLite consensus disorder prediction 485 500 - -
Dere01g3250 518 Pfam F-box-like 100 142 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3250 Dere-ChrDere01 47278350 47283714 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3250 01 47278350 47283714 Dere01g3250 01 47278350 47283714 ECH