Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3239 ATGCTGCTGAGGAAAAGATCAAGAGCAGCGATCAATCCACCTTTAATGGCTGATCATACCTCTCAGCCATCTCCTAATCAAAATTATGCTAGAGTTATTCAATCCTTCTTTAGTTCTCCGAAATTTAGAGACTTCACCACCAAGTGTCTCTCAGGAGCTGAGGCTTTAAGAAGCCCAACTTCAATTCTTGACTCCATATTACTGCCACCTCTGGGGACTGTCTCGTCCAAAATTTCCCCAGAAAAGAAAAGCTCTCGGGACAAGATGGATTCAAAAGGCATCGGGCTCGCTCTAGTTGATGCACTTAAAGATGAGGGACTAGAAGAGAATTCTGATAAACCCAGCAATGGAAATGTCCTGTTTGGAACACAACTCAGAGTAAAAATCCCTCCTTTGTCACCTTTTACATTTTATCCGCTTGAATCTCAAAGGAGTTCGGATGGTTTTGGAACTAAAACTCAGGATTCGCTTGTATCCCCCACTGGGTCTCAAAGTTCAGAAATTTATACAGAGGATTCTCCAAGGGAAGTTTCCACAGGAGTTGTGTCCTTGAGTGAAATGGAGCTTTCTGAGGAGTATACTTGTGTGATATCCCATGGGCCTAATCCAAGAACCACACATATATTCGATAATTGCGTTGTGGAGAGCCATTGTTCTTTGCCAGATGCCTCCCACTCTGCTTCGGGAAATTTCCTCAGCTTCTGTCACACTTGCAAGAAGCATCTTGAGCACACAAAGGACACCTTTATGTACAGAGGTGAGAAAGCTTTTTGCAGTCGCGAATGCCGGTACCAGGAGATGATGTTGGACGGAGCAGAGAATTCAGAATTCGATATTTATCATCACTCTTGA 852 0.4354 MLLRKRSRAAINPPLMADHTSQPSPNQNYARVIQSFFSSPKFRDFTTKCLSGAEALRSPTSILDSILLPPLGTVSSKISPEKKSSRDKMDSKGIGLALVDALKDEGLEENSDKPSNGNVLFGTQLRVKIPPLSPFTFYPLESQRSSDGFGTKTQDSLVSPTGSQSSEIYTEDSPREVSTGVVSLSEMELSEEYTCVISHGPNPRTTHIFDNCVVESHCSLPDASHSASGNFLSFCHTCKKHLEHTKDTFMYRGEKAFCSRECRYQEMMLDGAENSEFDIYHHS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3239 283 Pfam zinc-finger of the FCS-type, C2-C2 225 271 IPR007650 -
Dere01g3239 283 ProSiteProfiles Zinc finger FLZ-type profile. 230 274 IPR007650 -
Dere01g3239 283 PANTHER FCS-LIKE ZINC FINGER 8 3 275 IPR044593 -
Dere01g3239 283 MobiDBLite consensus disorder prediction 1 25 - -
Dere01g3239 283 MobiDBLite consensus disorder prediction 146 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3239 Dere-ChrDere01 47170531 47171534 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3239 01 47170531 47171534 Dere02g0700 02 6566758 6567830 CCT
Dere01g3239 01 47170531 47171534 Dere01g3239 01 47170531 47171534 ECH