Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3237 ATGGAAACACCTATTCCCATTCATTCTGTCCGATGTGAAAACGCTCACAGGAAAAATAGAAGGTACATATTTATTCGCTCGCAAGTCACAAAACACGGCGTTGTGTCTGTAACTCTGCGTTTCCTTTCCCGTGCAAGTCCGGCCACATCCAATACTCTTCCCAACGCCACTCTCGTTCTCCTTCTCCCGCTTACTTTCGTTTTCAGTGAATATGAACGCGATGACAAGGTCACGGGTTGCAATTCTGGGTTTTCCATCGGTTTCTTACGCTTGAACGCACTAAATTCAAGACTGCATAGGTTGTCACATGTTCTGTGCTGTGTCGCTTATTATGCAGCCATGTATGACAGGGGGGACCACTGGTTTGAAACCCTTTGGCTCTCTGCATTTCAACACAAATCCAGTGCTGGAGAATTAACAGACACAGATGAAATAGTGATTATTATGTCTGGATTGATTGAAGGACTTCCTGATGCAGTTGCGATAAGGTGCCTTGCACGGGTTCCCTTTTACCTGCACCCAAAACTAGAAGTTGTCTCTCGCTCTTGGCGAGAAGCTGTTCATAGCCCTGAACTGTTTAAAGCTCGACAAGAGGTTGGTTCATCTGAGGATCTGTTATGTGTCTGTGCCTTCGATCCAGAGAACCTATGGCAGCTTTATGACCCTCTACGAGACCTCTGGATTACACTTCCTGTTCTCCCCTCAAAAATTAGACACCTTTCCCACTTTGGTGCTGTCTCCACTGCTGGAAAGCTATTTGTGATTGGTGGCGGAAGTGATGCTGTAGATCCATTGACTGGTGACCAAGATGGGAGTTTTGCAACAAATGAAGTCTGGTCATATGACCCGGTAGTCCGGCAGTGGACCCCACGTGCATCAATGCTTGTCCCCCGTGCTATGTTTGCATGCTGTGTTTTGAATGGAAAGATAGTTGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCCCAAGCAGAAATGTATGACCCTGAAAAAGATGTGTGGATTCAAATGCCTGATCTGCATCGCACCCATAATTCAGCTTGTTCAGGAGTAGTTATTGGAGGAAAGGTACACGTATTGCACAAAGGGTTGTCAACAGTGCAAATTTTGGACAATGGAGAGCCTCCTGGGTGGACTGTTGAGGAATGCGGGTGGCTCCAAGGTCCGATGGCAGTTGTTGGAGGTGCCTTTTATGTGATGAGCCATGGATTTATTATCAAACAGGACGAAGGTGGGAGAAAGGTAGTGGGTTCAGCATCGGAGTTTCGAAGGAGAATTGGATTTGGAATGATTGGGGTGGGTGATGATTTATACGTGATTGGAGGCTTCATTGGCCCTGACAGGTGGAACTGGGACATTAAGCCATTGGCCCACGTCGATATTCTTACACTTGGGAGTGACAGACCAACCTGGCGTCAGGCCTCTCCCATGTCTCGGTGTCGTGGTACTATTCTTGGTAGTATACTGCTGAGAATTTAG 1485 0.47 METPIPIHSVRCENAHRKNRRYIFIRSQVTKHGVVSVTLRFLSRASPATSNTLPNATLVLLLPLTFVFSEYERDDKVTGCNSGFSIGFLRLNALNSRLHRLSHVLCCVAYYAAMYDRGDHWFETLWLSAFQHKSSAGELTDTDEIVIIMSGLIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWREAVHSPELFKARQEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWTPRASMLVPRAMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIQMPDLHRTHNSACSGVVIGGKVHVLHKGLSTVQILDNGEPPGWTVEECGWLQGPMAVVGGAFYVMSHGFIIKQDEGGRKVVGSASEFRRRIGFGMIGVGDDLYVIGGFIGPDRWNWDIKPLAHVDILTLGSDRPTWRQASPMSRCRGTILGSILLRI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3237 494 PANTHER OS02G0202900 PROTEIN 142 403 IPR045887 -
Dere01g3237 494 SMART kelc_smart 438 493 IPR006652 GO:0005515
Dere01g3237 494 SMART kelc_smart 251 308 IPR006652 GO:0005515
Dere01g3237 494 SMART kelc_smart 309 356 IPR006652 GO:0005515
Dere01g3237 494 Gene3D - 209 489 IPR015915 GO:0005515
Dere01g3237 494 Pfam Kelch motif 240 294 IPR006652 GO:0005515
Dere01g3237 494 Pfam Kelch motif 297 342 IPR006652 GO:0005515
Dere01g3237 494 CDD F-box_AtAFR-like 152 196 - -
Dere01g3237 494 SUPERFAMILY Kelch motif 209 483 IPR015915 GO:0005515
Dere01g3237 494 SMART fbox_2 156 196 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3237 Dere-ChrDere01 47155802 47161047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3237 156 416 Miscellaneous Gene Families AT4G33900 26.715 3.09e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3237 01 47155802 47161047 Dere01g3237 01 47155802 47161047 ECH