Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3228 ATGAGAGATGAGAACACGAAGAAAAGCAAGCTTTCATGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCCGAGGACTTTCAGGCAGACGCTTTCCTTTACGGAGGTGTTGATGAGGAGTGGAGGAGCAACTATCCAGAGAGGGAGGCATGCGCTATCAAGAAAAGTAAAACAGAGAGATCAAGCAGGAGGTACTCGAACAAATTGCGGCGGGGTAAGATTGACCTTGATGCTTATCAGTTTACGGATGTGCATAATTATGGGATCTTCGTTGCAACATGGAATGTAGCTGGAAGATCTCCCCCAAGCTATTTGAATCTTGAAGATTGGCTTCACACCTCGCCACCTGCTGATATATATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCCGGTAATGTTCTGGGCACTGAAGACAATGGCCCTGCTAGAAAATGGCTAGCTCTCATTAGGAAGACCCTAAACAGTCTTCCTGGAACAAGTGGTGCATGCCACACTCCATCACCGGTCCCTGATCCAATTGTAGAGTTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCTCTCTCTTCCACCGGAGGTCCTTCCAATCCTTGGGTCGGAGTATGAGAATGGACAATGACATGTCACTGCCACAATCACAACTTGATCGCCGTCTCAGTGTCTGTGATAGAATGATATTTGGTCATAGGACTAGTGATTATGACTCCAATTATAGATGGTGTTCCTCAGATGATGAAAACGGAGCTGGTGATTCACCAGTTATAACACAATATTCACCAATGTCATACAGTGCTTCTTTCTCCGCAGAGGACAGAGATAGACAAACAGGGCACTCAAGATACTGCTTAGTTGGCAGTAAGCAAATGGTGGGGATATTTCTGACTGTTTGGGTGAAAAGTGATATCAGAGATGAAGTCCACAACATGAAAGTGTCTTGCGTTGGCAGAGGATTGATGGGTTATCTTGGAAACAAGGGTTCAATTTCGATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAAGATGGTGATGAGCTACGAAGAAATTCAGATGTCATTGAGATTCTTAGAAAGACAAGGTTTCCCCGGGTTCACGGCAAGGGTGATGAGAATTCTCCTCAGACAATTCTGGAACACGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCACTTTCTTACCGTGCAGCAAAAGCCCTTGTTGAGATGCGGAATTGGAAGGCATTGTTAGAGAAAGACCAGCTGCGTATAGAGCAGAGACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGGAAAATATATTTTCCTCCCACATACAAGTATTCTAATAATTCAGACAGATATGCAGGCGATGAAAGACACTCAAAACAGAAGCGAAGAACTCCAGCATGGTGCGATCGTATCTTGTGGTATGGAAGAGGACTCCGCCAGTTATCCTATGTTCGTGGGGAGTCAAGATTCTCTGATCATAGACCAGTTTATAGCACATTCCTGGCAGAAGTAGAGTCCATTAACCGAAGCCGAATCAAAAAGAGCTCCAGTTGCTCTAGTTCCAGGATTGAAGTAGAAGAGTTGTTGCCACATTTACATTGTTACAGTTACACTGACATGAATTTCCATTGA 1683 0.4391 MRDENTKKSKLSWPKTLVKKWFNIKSKAEDFQADAFLYGGVDEEWRSNYPEREACAIKKSKTERSSRRYSNKLRRGKIDLDAYQFTDVHNYGIFVATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGACHTPSPVPDPIVELDADFEGSMRQKATSLFHRRSFQSLGRSMRMDNDMSLPQSQLDRRLSVCDRMIFGHRTSDYDSNYRWCSSDDENGAGDSPVITQYSPMSYSASFSAEDRDRQTGHSRYCLVGSKQMVGIFLTVWVKSDIRDEVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVIEILRKTRFPRVHGKGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMRNWKALLEKDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSTFLAEVESINRSRIKKSSSCSSSRIEVEELLPHLHCYSYTDMNFH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3228 560 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 545 - -
Dere01g3228 560 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Dere01g3228 560 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 537 IPR045849 GO:0004445
Dere01g3228 560 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
Dere01g3228 560 SUPERFAMILY DNase I-like 75 533 IPR036691 -
Dere01g3228 560 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Dere01g3228 560 Gene3D Endonuclease/exonuclease/phosphatase 71 206 IPR036691 -
Dere01g3228 560 Gene3D Endonuclease/exonuclease/phosphatase 263 544 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3228 Dere-ChrDere01 47118839 47121838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3228 292 527 Acyl Lipid Metabolism Gene Families AT2G43900 30.325 7.71e-33 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3228 01 47118839 47121838 Dere02g0707 02 6614290 6618463 CCT
Dere01g3228 01 47118839 47121838 Dere01g3228 01 47118839 47121838 ECH