Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3223 ATGGCGGCTAAGTCCCACGCAGATTCTAAAAGAAAGTATTCGTGGTGGTGGGACAGCCATATAAGCCCGAAGAACTCAAAATGGCTTCAAGAAAATCTGACAGATATGGATTCCAAGGTAAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTCGCCAGGAGGGCAGAAATGTATTACAAAAAGCGCCCAGAGCTTATGAAATTGGTTGAAGAGTTTTATAGAGCGTACCGTGCGCTGGCTGAGAGATATGATCATGCAACTGGAGTCATTCGCCAAGCTCATCGGACTATGGCCGAAGCATTTCCTAACCAAGTCCCTTTGCTACTGGCAGATGATTTACCAACTGTTCCTTTTACAGAGGCTGAGCCACGAACTCCTGAGATGTCACACTCCTCACTTGCATTTCTTGACCCTGATGAGTTGCAAAAGGATGGTTCTGGAATATCTTCATCTCCTTTCCATGCCATCAAAAGAAATGGAGCTTTTACTGAGGAACCTGAATCTGCTAAAAGCCGAAGGGGTTTGAAACAGCTTAATGATCTCTTCATGTCTGGAGAAGGAGAAGGGCGTGCTAGAAAGGGGCTCAATTTTCATGATGTGGATAGTGAGAGTGATAAGAAAATCAATGAGAGCCCTGATACCAGGGCTCAAGTTCTCTCTGAGTCTGAACGGGTGACTAGGGCTGAGGCAGAAATATTGGCATTAAAGAGAGCTCTAGCTAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAATATCAGCAGAGTTTGGAGAGATTGTCTAATCTAGAGTCAGAAGTGTCTTGTGCACAACAGAATTCCCAGGGACTCAATGAACGGGCCAGCAAGGCTGAAGCTGAAGTTCAAGCTTTGAAAGAAGCCCTTAATAGATTACAGGTTGAAAGGGAAGCCAGTCTTCTTCAGTACCAGCAGTGCTTGGAGAAAGTATCCAACCTGGAGAAAAATATTTCCTCTACTCAGAAGGATGCAGGAGAACTTAATGAAAGAGTTATCACAGCTGAAATTGAAATTGAATCCCTAAAGAAGGACCTTGCTACAGTAGAAGCTGAAAAGGAAGCAGCCCTTGTTCAATACAAACAATGCTTGGAGACAGTATCAATATTGGAGGACAGATTAGTAGAAGCTGAGGAGAATGCAAGAAGGATTAATGAGCAAGCTAATAAAGCTGGAAATGAAATTGAGGCCTTGAAGTTAGAAATTTCCAAACTAACTGAAGAGAAGGAAGATGCTGCTCTCCGATATCAACAATGCTTGGAAATAATTTCCAGTTTGGAGCATAAACTCTCTTATGCTGAAGAGGATGTGCGTAGGCTAAATTTCAAGATAGATGATAGCATTGAAATGTTGCAGAATTCTGAGCAGAAATGTCTCCTCTTGGAAACTTCAAATCAAAATCTACAGTCTGAATTGCAGTCCTTGGTGCAAAAGATGGGGTGTCAAAATGAAGAACTTAGTGAGAAGCAAAAAGAATTAGGTAGGCTTTGGAATTGCATACAAGAGGAGAGGTTGCGGTTTGTGGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCACTCTCAGTCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAGCTTCATCATAAGGCTGAAATTCTGGAGAATGTGGAATTCTGTAAGCAGGGTCTAGAGGATGAAGTTCAAAGGGTGAAGGAGGAAAACAAAATTTTAAATGAGTTCAAAATTTCTTCATCTTTGTCATCTAAAAATTTGCAGGATGAGATATTAAATCTGAGGGAGACAATGAAGAAACTTGAAGAAGAGGTTGAACTGCGAGTAGATGAGAGAAATGCTCTCCAGCAAGAAATTTACTGTCTTAAACAGGAGCTTGGTGATGTGAATAAAAGACATGATGCTATGCTGGAGGAGGTTGGTTCGAGTGGCTTAGATCCACACTGCTTTGGGTTGTCTGTGAAGAAATTGCAGGATGAGAACTCAAAGTTGAAAGAGACATGTGAGGCTGACAAAAAAGAAAAAGCAACTCTTCTGGAAAAACTGGGGATCATGGAGAAACTTTTGGCGAAAAATGCTATTTTGGAGAATTCACTCTCAGACTTGGATGTTGAATTGGAAAGTGTCAGAGAAAAGGTAAAGGTGTTAGAAGAAACATGCCAATCTCTGCTTGGGGAGAAATCCATTCTCACTGCTGAGAAGGTCACCTTGTTTTCTCAGTTACAAACTGCAGCTGAAAAGCTGGAGAATCTTTCAGAAAAGAACAACCTTTTGGAAAATTCCCTATTTGATGTCAATGCTGAACTTGAAGGATTAAGGGTAAAGTCAAAAAGCTTAGAAGACTCATACCACTTACTTGACCATGAGAAGTCCAATCTGATCTCTGAGAAAGAAGCCTTAGTTCTACAGCTGAACATTGCTCATCAAATGCTGAAAAATATTGAGGATCAACACAATGAGTTGGAACTAAAGCATTTGGAACTGAAAGGCGAAAAGGAATCTGCGCTGCAAAAAGTAGAGGAGCTCTTGGTTTCCTTATATGCAGAGAGAGAAGAACACTCCAGAATTGTGCAATTGGATGAAAGTCACTTGGCTGAGAAGGAATTACAAATTCATATTTCAGAAGAATATGCAAATTGTATGAAAAAGGAATATGAGGGGGAACTGGACAAAGCAGCACATGCTGAAATTGAAATTTACATCCTGCAGAAATGCATCAAGGATCTGGAGAAAAAGAACCTCTCCCTTTTAGTTGAGTGTCAAAGACTGTTGGAGTCATACAAAATGTCTGAGGGGCTGATATCTAAATTGGAGAATGAAAATGTTCAAAAGCAGGTTGAGATAAATTCTTTATTTGACAGAGTCAAAATACTAAGGATTGGGCTGCTTCAAGTGTTGAAGACTCTTGACCTTAACAGTGAGCATTATTTTGATGATTTGACTGAACATGACCATATTCTTCTGAACCATATACATGGCAAACTTCAGGAGAGACAGAATAATCTTGATACAATTTTCAATGAAAGCCAGCACATGGCCGTTGATAATTCAGTTCTTGTCACATTCCTTGAGCAGTTGAAGCTAAATGCAGAAAAACTTGTGACAGAAAGAGATTCCCTTGATAAGGAATTGAGGATCCAATCTGAACAGCTTTTGGCTTTGCAAACAGAAGTCCAAAACATAAGGGTGAAGAATCAAGAATTGAAGCTGGCAATAAGCAAGGGTGAACAAAGAATGGAAGAGATGGCAACCAGAATGGAGGATCTACTTAAGCAGCTGTCGGACTTGAAAGAGGCTCACAAAAACTTACAAGACGAAAGTTACAATACATTGGAAGAGAAAAATTCCTTGATGAGGAGATTCCTTGATCTGAGTGAAGAGAAAAGTAACTTGGAAGAAGAAATCTGTGCTATGATTCGTGAGACAATAGATCAATCCAATATTTCTCTGATCTACCAGAACATTGTTTTTGAAAAAGTCCTGGCACTCAGAGAGCTAAGTGAAGATCTCAGTGGACTCTGTTCAGTAAATAATGATCTCAACAAGAGGTTAAAAGCTATGGCAGACAAATTAGAAGATGTAGAAATGGAAAATTCACATCTTAATGGGTCATTTGACAAGTCCAGCATTGAACTAAAATCACTTCAATCTATCAATGATCAATTAGGTTGCCAGATTCAGAAGGGAAAGGAATTGTTGTCTCAAAAGGAAAATGAGCTTTTGGAAGCAGCAGAAATGTTTAGTGCTTTACGCACTGAGAAAACAGATTTGCAAAAAATGCTAGAAGATCTAAAGCATAAGTATGATGAGGCCAGGGTGATACTTGAAGATCAAGCTAGTCAAATTTTGAATCTATCCTCAGACAAGGATCGTCAGAGTGAAGAGCTCAGATGCCTTTGTGAAGTGAATCAGAGGTTAGAGTCTGAAATGAGGTACCTTCGTGAAGAACTTGAAGAAACTAAAGTCAGGGAAGAGAAGTTAAGTTATCAACTGAACAAGGGAACAAATGAGATTGAGCTATGGAAAACTCAGGCTGCCACCCTTTATGCAGAAGTGCAGGTATCTACTGTCAATGAAACATTAGTTGAAGGAAAGGTTCGTGAGCTAGCTGATGCTTGTGAGAGTCTTGAACGTGGATATAACAATAAAAGTGCTGAAACTGAATGGCTGAAAGAAAGAGTTAGCAAGTTGGAAAGTGAAAATGGAAGATTGCATGGTCAGTTAGTTGCTTATGTCCCAGCCGTCAGTGCTTTGAAGGATTGTATAACATCTTTGGAGATGCAGACTCTTGTGCATGCAAAACCTCACAACTATGATGAATCAAAGGTTAATAATTTGATGAATTACCAACCCACTGAAGGCGGTCCACAAACAGGTGAAAACCAGATTGCCATGGCACCAGATGCACTTCCAGACATCCAAGACATGCAGAAGAAGATTAATGCAATTGAAATGGCTGTTAAACATATGAATGAATGCTTCAAACCAAAGTATGAATTGAGAGAGATTCAAGAGTTACAAGGTAATGGCTGCAATCAAGGGAACATTCAATCTAGTAAGCAAGTTACTCAAATGAATGAAGCAAAGGAGCATCAGGATGAAACTAATGATAAACAGAAGATAGGGAAATCAATTCCGGATATCCCTGTAGAGAATGATGTTTTGACAAAAGACATCATACTTGATCAAATGTCTGGAAGTTCATTGTATGGGATAAGTAGGAGAGAAAATCTTGAGGCTGATGATCAGATGCTCGAGTTATGGGAAACTGCTAATAAGGATAGCAGTATCGGCCTGACTGGTGGCAAGGTACGAAAGGTGACCACTAGACCTGCGAACTACCATCAAAGTGGAGAAACTAGGGAACCCAAAAATAAATATACCTCGGTGGAGTCATTGGTTGAGAAGGAGTTGAGTGTGGACAAATTAGAGATCTCAAAAAGATTGACACAGCCACGTGAAGAAGACAACAAGAGGAAGATAATAGAAAGACTTGATTATGATGCACAAAAGTTGGCAAACCTTCAAATTACTGTGCAAGATTTGATGAAGAAGGTTGAGCCCACTGAGAAGAGCGCAAAGGGAAAAGGAATTGAGTTTGATAGTTTGAATGGGCAGCTTCAAGCTGTTGAGGAGGCCATCACCAAGTTATTTGATGCTAATCGCAAGCTGATGAAGAACGTAGAAGAAGGAACCCTGTCCTTTGTCGGAAATCCTGAACCAGAGTCAGATGAGAGTGGAAGCATCAGCAGGAGGGTTTCAGAACAGGCACGGAGAGGATCAGAAAAAATTGGACGGTTGCAATTGGAGGTGCAGAGACTACAGTTTCTTCTCCTCAAACTTGACGATGAAAGAGAAAGCAAAGGAAAAGCAAGAATAGCTGATCGAAGTCCTAGAGTCCTTTTGCGAGACTATCTCTATGGTGGGACAAGAACCAACCAGAAAAAGAAAAAAACACCTTTTTGTTCGTGTATGCAACCTCCCACCAAGGGAGATTAG 5502 0.4033 MAAKSHADSKRKYSWWWDSHISPKNSKWLQENLTDMDSKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPLLLADDLPTVPFTEAEPRTPEMSHSSLAFLDPDELQKDGSGISSSPFHAIKRNGAFTEEPESAKSRRGLKQLNDLFMSGEGEGRARKGLNFHDVDSESDKKINESPDTRAQVLSESERVTRAEAEILALKRALAKLEDEKEAGLLQYQQSLERLSNLESEVSCAQQNSQGLNERASKAEAEVQALKEALNRLQVEREASLLQYQQCLEKVSNLEKNISSTQKDAGELNERVITAEIEIESLKKDLATVEAEKEAALVQYKQCLETVSILEDRLVEAEENARRINEQANKAGNEIEALKLEISKLTEEKEDAALRYQQCLEIISSLEHKLSYAEEDVRRLNFKIDDSIEMLQNSEQKCLLLETSNQNLQSELQSLVQKMGCQNEELSEKQKELGRLWNCIQEERLRFVEAETAFQTLQNLHSQSQEELRSLAAELHHKAEILENVEFCKQGLEDEVQRVKEENKILNEFKISSSLSSKNLQDEILNLRETMKKLEEEVELRVDERNALQQEIYCLKQELGDVNKRHDAMLEEVGSSGLDPHCFGLSVKKLQDENSKLKETCEADKKEKATLLEKLGIMEKLLAKNAILENSLSDLDVELESVREKVKVLEETCQSLLGEKSILTAEKVTLFSQLQTAAEKLENLSEKNNLLENSLFDVNAELEGLRVKSKSLEDSYHLLDHEKSNLISEKEALVLQLNIAHQMLKNIEDQHNELELKHLELKGEKESALQKVEELLVSLYAEREEHSRIVQLDESHLAEKELQIHISEEYANCMKKEYEGELDKAAHAEIEIYILQKCIKDLEKKNLSLLVECQRLLESYKMSEGLISKLENENVQKQVEINSLFDRVKILRIGLLQVLKTLDLNSEHYFDDLTEHDHILLNHIHGKLQERQNNLDTIFNESQHMAVDNSVLVTFLEQLKLNAEKLVTERDSLDKELRIQSEQLLALQTEVQNIRVKNQELKLAISKGEQRMEEMATRMEDLLKQLSDLKEAHKNLQDESYNTLEEKNSLMRRFLDLSEEKSNLEEEICAMIRETIDQSNISLIYQNIVFEKVLALRELSEDLSGLCSVNNDLNKRLKAMADKLEDVEMENSHLNGSFDKSSIELKSLQSINDQLGCQIQKGKELLSQKENELLEAAEMFSALRTEKTDLQKMLEDLKHKYDEARVILEDQASQILNLSSDKDRQSEELRCLCEVNQRLESEMRYLREELEETKVREEKLSYQLNKGTNEIELWKTQAATLYAEVQVSTVNETLVEGKVRELADACESLERGYNNKSAETEWLKERVSKLESENGRLHGQLVAYVPAVSALKDCITSLEMQTLVHAKPHNYDESKVNNLMNYQPTEGGPQTGENQIAMAPDALPDIQDMQKKINAIEMAVKHMNECFKPKYELREIQELQGNGCNQGNIQSSKQVTQMNEAKEHQDETNDKQKIGKSIPDIPVENDVLTKDIILDQMSGSSLYGISRRENLEADDQMLELWETANKDSSIGLTGGKVRKVTTRPANYHQSGETREPKNKYTSVESLVEKELSVDKLEISKRLTQPREEDNKRKIIERLDYDAQKLANLQITVQDLMKKVEPTEKSAKGKGIEFDSLNGQLQAVEEAITKLFDANRKLMKNVEEGTLSFVGNPEPESDESGSISRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLDDERESKGKARIADRSPRVLLRDYLYGGTRTNQKKKKTPFCSCMQPPTKGD 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3223 1833 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Dere01g3223 1833 Coils Coil 686 727 - -
Dere01g3223 1833 Coils Coil 1115 1135 - -
Dere01g3223 1833 MobiDBLite consensus disorder prediction 194 215 - -
Dere01g3223 1833 PANTHER PROTEIN NETWORKED 4A 282 390 - -
Dere01g3223 1833 MobiDBLite consensus disorder prediction 1734 1763 - -
Dere01g3223 1833 Coils Coil 522 542 - -
Dere01g3223 1833 MobiDBLite consensus disorder prediction 190 219 - -
Dere01g3223 1833 MobiDBLite consensus disorder prediction 1746 1763 - -
Dere01g3223 1833 SUPERFAMILY Tropomyosin 208 418 - -
Dere01g3223 1833 Coils Coil 735 769 - -
Dere01g3223 1833 MobiDBLite consensus disorder prediction 1608 1627 - -
Dere01g3223 1833 Coils Coil 228 423 - -
Dere01g3223 1833 Coils Coil 1234 1282 - -
Dere01g3223 1833 Coils Coil 1290 1324 - -
Dere01g3223 1833 Coils Coil 907 955 - -
Dere01g3223 1833 SUPERFAMILY Tropomyosin 404 641 - -
Dere01g3223 1833 Coils Coil 585 633 - -
Dere01g3223 1833 Coils Coil 655 682 - -
Dere01g3223 1833 Coils Coil 1024 1107 - -
Dere01g3223 1833 Coils Coil 1178 1198 - -
Dere01g3223 1833 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Dere01g3223 1833 Coils Coil 459 500 - -
Dere01g3223 1833 Coils Coil 1708 1728 - -
Dere01g3223 1833 Coils Coil 550 577 - -
Dere01g3223 1833 Coils Coil 805 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3223 Dere-ChrDere01 47067184 47074842 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3223 01 47067184 47074842 Dere02g0711 02 6632165 6640399 CCT
Dere01g3223 01 47067184 47074842 Dere01g3223 01 47067184 47074842 ECH