Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3175 ATGAAAAGGAAAAATGTACGATGTTCATCTCTCACGTCTGAATTTTCTTCAGATGATAACTTCAAGCCCAACTTCACGCAGATCCTCGTTGCCTCTTGTATTGGATTGATTTTTGCCTTAGCATTGCATAAATTTATGAAAAGGATAAGAGATCAGAAGATCATTCCACGTATGAGATTATCAGAAACAGGGCACGCTCCGAAGCTGGAAAGGTTCTCCCATTATGTAGCTAGGCAACTGGGGTTAGATAGAAGAAATTGTCCACAATTATGTAAACTGGCATCAGAATACATAAGGAAATGCGAGGGATATGAAGATGATATATACTCGTACTTCGCAAGCGAACCAGACGCGGATTCTTTGTATGTGAAGCTTGTGGAGGAGTTCGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGAACCATGCTGATATAATGATAAGTCAGGTATTCCAACTTTTTAGTATTCCTACAAATGAAATGTTTCATATCTTCTGCGAAACTGAACCCAAAAGGAAGCTCAAGCATATAGTTATGGCAGCAACCAGGGAGCAAAGGTTTGAGAGGGTGACCAAGAATCTGAAGGTGGCTCGAGTTTTCAACACACTAGTAGAAGAGATGAAGGCAATGGGGCTGGCAGCAAATGACGACTCTCTATGTACGGAGGTGATGGCTCCAGTAGCTCACAGTGATAGGAGTCCAGTGCTCCTCCTCATGGGTGGCGGCATGGGAGCAGGGAAGAGCACCGTGCTTAAAGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGGAGGCAATGCCGTAGTGATTGAGGCAGATGCCTTCAAAGAATCAGATGTCCTATATAAGGCCCTTAGCTCTAGAGGGCATCATCCTGACATGATTCGAACAGCTGAACTGGTTCATCAATCATCTACAGATGCAGCCTCATCCCTGCTGGTAACAGCACTAAATGAAGGGCGAGATGTGATTATGGATGGCACTCTCTCCTGGGTACCATTTGTTGTGCAGACTATAACAATGACCAGATGTGTCCACCGCCACCGTTACCGCATGGGACCTGGTTATAGGGTGGCTGAAGATGGTACTGTAACTGAAAACTATTGGGAACGAAGAGGAGAAGTAGAACCCGAACAAAATGGAGGGAAAAAAAGAAAACCATATAGGATAGAGCTGGTTGGAGTGGTATGCGATGCTTACCTTGCAGTCGTTAGAGGAATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTAAACTCACAATTGAAATCCCACAAGAGATTTGCTGAAGCATTTCTGACTTACTGTCAATTGGTAGACAATGCCCGACTTTATGTAACAAATGCATTGGAAGGCCCGCACAAGATGATAGGATGGAAAGATAGAGACAAGACACTATTGGTTGATCCAGATGAAATTGACTGTCTGAAGAAGGTAGCTAGGTTGAATGAGGAAGCCAATTCAATATATGAACTTTACAAGCACCCAAACCCAGCTCATGAAGCTGGATCAGTATGGAAAGACATTGTATTATCACCTTCAAGGATGAACATCCAACAGGAGCTCAAGTATTCGATCCAAAAGGCTGAGAGATCGAAATAA 1608 0.4341 MKRKNVRCSSLTSEFSSDDNFKPNFTQILVASCIGLIFALALHKFMKRIRDQKIIPRMRLSETGHAPKLERFSHYVARQLGLDRRNCPQLCKLASEYIRKCEGYEDDIYSYFASEPDADSLYVKLVEEFERCILSYFAFHWNHADIMISQVFQLFSIPTNEMFHIFCETEPKRKLKHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLAANDDSLCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAGGNAVVIEADAFKESDVLYKALSSRGHHPDMIRTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMTRCVHRHRYRMGPGYRVAEDGTVTENYWERRGEVEPEQNGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLKSHKRFAEAFLTYCQLVDNARLYVTNALEGPHKMIGWKDRDKTLLVDPDEIDCLKKVARLNEEANSIYELYKHPNPAHEAGSVWKDIVLSPSRMNIQQELKYSIQKAERSK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3175 535 PANTHER UNCHARACTERIZED 19 534 IPR044802 -
Dere01g3175 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Dere01g3175 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 366 IPR027417 -
Dere01g3175 535 Gene3D - 219 467 IPR027417 -
Dere01g3175 535 Pfam Zeta toxin 229 331 IPR010488 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3175 Dere-ChrDere01 46482981 46486351 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3175 01 46482981 46486351 Dere01g3175 01 46482981 46486351 ECH