Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3159 ATGATCGAATCTCCTTCACCGCAATCCACTGCACCCGCCGTTGATCAAAATCTGACTTTAATTCCGGGCCTTCCCATCGACGTCGCAGCCATTATCCTCTCCTTTATCCCCTACTCCCACCATGCTCGCCTGAAACCCACCTGCAAATCATGGAATCTCTTCCTCTCCTCCAGAACTTTCATCTCTCTCCGCCGTCACCATCGTCACCTCTCTCACCTTCTCTGTATCTTCCCGCAAGACCCTTCCATAGCTTCCCCTTACCTCTTTGACCCCAACTCCCTCGCTTGGTGCCCTCTCCCTCTCATGCCATGTAACCCGCATGTCTATGGCCTCTGTAACTTCTCCTCTATCTCAATCGGTCCTCATCTCTATGTACTAGGAGGCTCCCTTTTCGACACCCGGTCCTTTCCGATTGATCGCCCCTCCCCGACTTCATCCACTTACCGTTTCAATTTCTATGATTTCTCATGGGAACGCCTAGCCCCCATGCTTTCGCCACGTGGCAGCTTCGCCTGCTCAGCCGTCCCTGATTCCGACCAGATTTTGGTGGCCGGCGGTGGGTCCAGACATACGATGTTCGCCGCCGCCGGAAACCGAATACGTTCCGTGGAGAGGTACGATATTCGGAAGGACGAGTGGGTTGAGATGGATGGATTACCGAACTATCGAGCGGGATGCGTTGGTTTCTTTGTTGGTAATCGGAAAGAGGACAGGAGGGAGTTCTGGGTGATGGGTGGATATGGTGCTTCCAGGACCATTTCGGGGGTTTTTCCAGTGGATGAGTATTATAGAGACGCGGTGGTGATGGAATTCAAAAATGGATTTCGTGATGGGAAGTGGAGAGAGGTTGGGGATATGTGGGGAGAAGGGGAGATGATGAAGCTTGGAAAGATTGTTGTGGTAGAGCATGAGGATCAAGGCTGTCCCGGCATTTTCATGCTCGATGGGAATGAGATTCTGAGATATGAAATGTCTTTGAATCGCTGGCTGTATGAGTCCCGTGTACCAAGAAAAGCTCCATACAACTCATCATTTGGTTTTGTAGTTGTAGATGGGGAACTGTATGTAATTACGCATTCAAGTGTAGTTGATATGACTGAAACAAGGAGGAGGAACAGACACCACAAGAGGGCGGGGACTCTATTTATACAAATCTATCACCCGAAGAAGAAGATGTGGAGATCTCTAGTCACCAAGTTGCCCTTCAATTACCCCGAAGATATTAATGCTGCTGTATTGAGTTCAATTAATCTGTGA 1257 0.4964 MIESPSPQSTAPAVDQNLTLIPGLPIDVAAIILSFIPYSHHARLKPTCKSWNLFLSSRTFISLRRHHRHLSHLLCIFPQDPSIASPYLFDPNSLAWCPLPLMPCNPHVYGLCNFSSISIGPHLYVLGGSLFDTRSFPIDRPSPTSSTYRFNFYDFSWERLAPMLSPRGSFACSAVPDSDQILVAGGGSRHTMFAAAGNRIRSVERYDIRKDEWVEMDGLPNYRAGCVGFFVGNRKEDRREFWVMGGYGASRTISGVFPVDEYYRDAVVMEFKNGFRDGKWREVGDMWGEGEMMKLGKIVVVEHEDQGCPGIFMLDGNEILRYEMSLNRWLYESRVPRKAPYNSSFGFVVVDGELYVITHSSVVDMTETRRRNRHHKRAGTLFIQIYHPKKKMWRSLVTKLPFNYPEDINAAVLSSINL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3159 418 SMART kelc_smart 122 177 IPR006652 GO:0005515
Dere01g3159 418 SMART kelc_smart 180 233 IPR006652 GO:0005515
Dere01g3159 418 SUPERFAMILY F-box domain 19 106 IPR036047 GO:0005515
Dere01g3159 418 Pfam Kelch motif 111 163 IPR006652 GO:0005515
Dere01g3159 418 Pfam Kelch motif 172 216 IPR006652 GO:0005515
Dere01g3159 418 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 4 418 - -
Dere01g3159 418 SUPERFAMILY Kelch motif 78 396 IPR015915 GO:0005515
Dere01g3159 418 Gene3D - 64 405 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3159 Dere-ChrDere01 46167252 46171310 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3159 01 46167252 46171310 Dere01g3159 01 46167252 46171310 ECH