Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3103 ATGGACAAGTTGAATCTAGCTCAATTGGGTGAGAAGCTGAAGACAGGTGGAGCCCAAATGGGTCGGATTGTTAGTGACAAAATGAAGGAAATATTGCAAACCCCAACACCCGAATCAAAGATGGTTGATGAAGCAACATTGGATATCCTAGAGGAGCCCAATTGGGGCATGAATTTGAGGATATGTGCAATGATCAATAGTGGAGAGTTTAACGGATCCGAGATTGTTAAGGCCATAAAGAAGAAGATTTCAAGCAAGAATATTGTGAGCCAGAGGCTCATTCTTGACTTGTTGGAAGCTTGTACTATGAATTGTGAGAAAGTGTTTTCTGAAGTGGCTTCAGAGAAGGTGCTTGAAGATATGGTTCGAATGATTGATAATCCACAAACGGATCATCAGAATAGAAGAAAGGCTATGCAGTTGATCAGGGCTTGGGGAGAGTCAGAGGATCTTGCCTATCTTCCAGTGTTTCGTCAAACCTATATGAGTTTGAAAGGAAGAAATGGGCATCTGGACATAAATGGAGGAAATTCAGAACATGTGCCATATTCCTTAGAGTCTCATATATACGAAGATCCATTGGATCCTCCTGGAAGTTACCCTCTACCTGATACAGAAGAGCATGATATGAATGGCGCTGCTTTCTCTTCTAATCACCTAGGTCCATCAGTGGAAGAAAAGAGGGAGCATCTTGTCATTGCTCGAAACAGTCTTGAACTACTCTCCACCATATTAAATTCTGGGTCAGAGCCAAAATTGCTGAAGGAAGATGTAACTGTGAGCTTGTTGGAGAAGTGCAAGCAGTCACTGTCTGTCATAAAGGGCATTGTGGAAAGCACCACTGATGATGAAGGAACACTTTTTGAGGCTTTGTACCTTAATGATGAGCTACAACAGGTTGTTTCCAAGTATGAGGAGTTGGAAGCTGCCCAAAATTCTGAAGCACAGCCACCTGTAAATGCTGATACGACCAAGCATGTTGCAGAAGCTGTTGAAAATCCCATCACACTGCCTGAAAGCTTTGAGGGCGATGAATCTGGAGAGTCAGATGCTGCTGAGACACTTCAAAGAAAGGTGCCCAAAAAGTTTGACACTCCTGATGTCAATGCAACTGCTGGTGTTGATGGTCACTCCGAAGCCAAAATGATGGATTACACAAAGGAGAAGGATGCAGCGCTGCAAAAAAAATACTGA 1194 0.4296 MDKLNLAQLGEKLKTGGAQMGRIVSDKMKEILQTPTPESKMVDEATLDILEEPNWGMNLRICAMINSGEFNGSEIVKAIKKKISSKNIVSQRLILDLLEACTMNCEKVFSEVASEKVLEDMVRMIDNPQTDHQNRRKAMQLIRAWGESEDLAYLPVFRQTYMSLKGRNGHLDINGGNSEHVPYSLESHIYEDPLDPPGSYPLPDTEEHDMNGAAFSSNHLGPSVEEKREHLVIARNSLELLSTILNSGSEPKLLKEDVTVSLLEKCKQSLSVIKGIVESTTDDEGTLFEALYLNDELQQVVSKYEELEAAQNSEAQPPVNADTTKHVAEAVENPITLPESFEGDESGESDAAETLQRKVPKKFDTPDVNATAGVDGHSEAKMMDYTKEKDAALQKKY 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3103 397 Gene3D - 28 174 IPR008942 -
Dere01g3103 397 MobiDBLite consensus disorder prediction 380 397 - -
Dere01g3103 397 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Dere01g3103 397 Gene3D - 219 311 IPR038425 -
Dere01g3103 397 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Dere01g3103 397 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Dere01g3103 397 CDD VHS 39 165 - -
Dere01g3103 397 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Dere01g3103 397 MobiDBLite consensus disorder prediction 350 364 - -
Dere01g3103 397 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Dere01g3103 397 SUPERFAMILY GAT-like domain 216 308 - -
Dere01g3103 397 MobiDBLite consensus disorder prediction 334 397 - -
Dere01g3103 397 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Dere01g3103 397 PANTHER TOM1-LIKE PROTEIN 1 1 354 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3103 Dere-ChrDere01 45520021 45522438 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3103 01 45520021 45522438 Dere01g3103 01 45520021 45522438 ECH