Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3096 ATGGATTCAATTCAAGAATTTATGGACACTTGTAACTCCGACAACGCCACCAGCCTCACCCACACCACCTCCACCACCGGCAGCAGCGGCTTAGCCGCTAGCTCCTCTTCGTCAGCTTCCACCACCACCACCAGCAGCCGCTACGAGAACCAGAAGCGTCGTGACTGGAACACCTTCGGTCAGTACCTCAAGAACCACCGACCCCCTTTGTCCCTCTGCAGGTGCAGCGGTGCCCACGTTCTTGAATTCCTTCGGTACTTGGACCAATTTGGGAAGACCAAAGTGCACACCCCGATCTGCCCTTTTTACGGGCACCCGAACCCTCCCGCGCCATGTCCGTGCCCACTTCGACAGGCGTGGGGCAGCCTGGATGCTCTCATCGGTCGCCTGCGAGCGGCTTTCGAAGAGAACGGAGGGAAGCCGGAAGCCAACCCGTTCGGAGCTCGAGCCGTGAGGCTGTACCTTCGTGAGGTTCGTGATCTGCAGTCGAAAGCAAGAGGGATTAGCTATGAGAAGAAGAAGAGGAAGCGGCCACCGCCGCCGCCGCCACCACCAGCACCCCAGCAACCACCAATGCCACTCCAACTACCTCTTCTTCATCATCATCATCATCTTCATCTCCCACATCCAGGTGCAACTCAATAA 645 0.5767 MDSIQEFMDTCNSDNATSLTHTTSTTGSSGLAASSSSSASTTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLCRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPPPPPPAPQQPPMPLQLPLLHHHHHLHLPHPGATQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3096 214 MobiDBLite consensus disorder prediction 18 51 - -
Dere01g3096 214 MobiDBLite consensus disorder prediction 180 194 - -
Dere01g3096 214 PANTHER PROTEIN G1-LIKE2 22 178 IPR040222 -
Dere01g3096 214 MobiDBLite consensus disorder prediction 18 47 - -
Dere01g3096 214 MobiDBLite consensus disorder prediction 165 195 - -
Dere01g3096 214 ProSiteProfiles ALOG domain profile. 47 174 IPR006936 -
Dere01g3096 214 Pfam ALOG domain 37 160 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3096 Dere-ChrDere01 45468831 45469569 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0810 02 7645530 7646261 Dere01g3096 01 45468831 45469569 CCT
Dere01g3096 01 45468831 45469569 Dere01g3096 01 45468831 45469569 ECH
Dere01g3096 01 45468831 45469569 Dere02g0283 02 2817312 2817851 ECH