Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3095 ATGGGTTCACTTCCTCCATTTTCAGATGATGCTCTTTTTCCCCCACCATCCAAAAACCCCCTTCATCTGATCGACGAAGCCACCCTCCTCGACCTCTTCAGATCTCAGCAGAACCACATCAACTTTTTCTTTAACAATATCGATCATTCTCAAACCCTTGCCTTCACTCAGATCCTCCTCAATTCCTCTGGTACCATTTTCTTCTCTGGCGTCGGCAAATCGGGATTCGTCGCCCACAAGATCTCTCAGACTCTTGTCTCCCTGGGCATCCGATCCGCATTCCTATCCCCTGTGGATGCTCTCCATGGCGATATCGGAATTCTTACCAATCGCGATGTTCTCGTCCTCTTTAGCAAATCTGGTACCACTGAGGAACTTATAAGGCTTGTGCCTTGTGCGAGGGCCAAAGGGGCCTATCTGATCTCGGTCACCTCCGTCGAGGGGAATGGGTTGGTGGGCATGTGCGATATGAACGTGCATTTGCCTTTGGAGAGGGAACTATGTCCCTTTAACTTGGCGCCGGTGACTTCCACGGCCATCCAGATGGTTTTCGGGGACACGGTGGCTATCGCGCTTATGGGAGCCAGAAATTTAAGCAAGGAGGACTACGCCAGCAATCACCCCGCTGGGAGGATTGGCAAGAGCCTTATCTTCAAGGTAAAAGATGTCATGAAGAAGCAAGATGAGCTTCCTGTTTGCCGGGAAGCAGATCTTATAATGGACCAGCTTGTGGAATTGACGAGTAAAGGATGTGGATGCCTGCTTGTTATAGATGAGGAACATCATCTGATTGGGACATTTACAGATGGTGATCTACGACGCACTCTCAAAGCTAGCGGGGAAGGCATTTTCAAGCTTACTGTGGGGGAAATGTGCAACAGGAATCCAAAAATCATTGTTCCAGATGCTATGGCAGTGGAAGCCATGAAGAAGATGGAAGCACCTCCGTCACCCGTACAGTTTTTGCCTGTTATCAGTGATGAAAATATCTTGATTGGGATTGTCACTTTGCATGGTTTGGTTTCAGCTGGCTTGTAA 1038 0.4865 MGSLPPFSDDALFPPPSKNPLHLIDEATLLDLFRSQQNHINFFFNNIDHSQTLAFTQILLNSSGTIFFSGVGKSGFVAHKISQTLVSLGIRSAFLSPVDALHGDIGILTNRDVLVLFSKSGTTEELIRLVPCARAKGAYLISVTSVEGNGLVGMCDMNVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMGARNLSKEDYASNHPAGRIGKSLIFKVKDVMKKQDELPVCREADLIMDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRNPKIIVPDAMAVEAMKKMEAPPSPVQFLPVISDENILIGIVTLHGLVSAGL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3095 345 PANTHER - 17 345 - -
Dere01g3095 345 Pfam SIS domain 60 190 IPR001347 GO:0097367|GO:1901135
Dere01g3095 345 Gene3D - 26 214 - -
Dere01g3095 345 CDD CBS_pair_SIS_assoc 216 341 - -
Dere01g3095 345 ProSiteProfiles SIS domain profile. 55 198 IPR001347 GO:0097367|GO:1901135
Dere01g3095 345 PIRSF KdsD_KpsF 16 345 IPR004800 GO:0005975|GO:0016853
Dere01g3095 345 Gene3D - 215 343 IPR046342 -
Dere01g3095 345 ProSiteProfiles CBS domain profile. 292 345 IPR000644 -
Dere01g3095 345 Pfam CBS domain 220 277 IPR000644 -
Dere01g3095 345 Pfam CBS domain 288 343 IPR000644 -
Dere01g3095 345 ProSiteProfiles CBS domain profile. 224 286 IPR000644 -
Dere01g3095 345 SUPERFAMILY SIS domain 32 344 IPR046348 GO:0097367|GO:1901135
Dere01g3095 345 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 64 335 IPR004800 GO:0005975|GO:0016853
Dere01g3095 345 CDD SIS_Kpsf 64 191 IPR035474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3095 Dere-ChrDere01 45449157 45451412 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3095 01 45449157 45451412 Dere01g3095 01 45449157 45451412 ECH