Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3088 ATGCCAATTGAAACACCAGTCTCAGTCTCAGGCTCTCTCAGTAGAAGTCATCGCCTGCAAAGTGCAAGAAGAATGGCCAGAAACCTAGGAGGATTTCTGGTGCTGTTTTTGGCTCTTTCGATCTGCCAGGCTGCTACGAATTTTGAGCCGATCTCTGACTCTCACCGATCCGCCGCCTTAGAACTCTTCAGCCCCATTGATGGATCCTTTGCTAGTTTAGAAGATACATACGAGGCCTTAAGAGTTTTTGAGATTCTTGCCATTGAAGAGAAGCCAGATGTCGGCACAACTACTTGTCAGAAAGTATTGGAAAATCTTGGGTCATCATCTCCTCCAAAGGATTTATTCTATGCCTTAAAAGTTAATAGCTTATTAAGATGTGGGGTCAATGAGGAGGTTTTCAAGGACATTGCTTCAAGACTTAAAGCCACTATCAATGATGCAAGTGCATTGCTTGAAATATACTACTCATTAGGAAGTTTGGTTCTTATCAAGGATCATGCTTCTAATGTTGATGTCCTTTTGGCTGATGCTGATGGAACTTTTCAATCTATCAAGGCTTTGAGTCAGAGTGATGGAAGATGGCGCTATAGCTCTGATAATCCAGACTCTAGTACCTATGCCGCTGGATTAGCCCTTGAAGCACTTGCTGGAGTGTTGTCACTAGCATCTTTGGAAATTGACCAGTCTAGGATCAATACAGTGAAAAAAGATATATTGAAGCTGTTCGACAGCATTGAGAAATATGATGATGGAACCTTTTATTTTGATGAGAAGATTGTTGGTACACAGGAGCATCTGGGTTCTCTTAAAACTACTGCTTCAGTTGTTCGAGGGCTTACAGCATTTGCAGCTGTAATTTCTGGAAAAATAAATCTTCCAGGGGATAAAATACTGGGTTTAGCAAAATTCTTCCTTGGCATTGGAATCCCAGGAGATGCAAAGGATTTCTTCTATCAAGTAGATTCATTAGCTTTTCTAGAAAGCAATAGGGTTTCCATCCCATTAATATTGTCACTTCCTGCAACAGTTTATTCGCTGACCCATAAAGACCAGCTAAAGGTTAGGGTGAATACAGTGCTTGGTTCAGCTGCACCGCCTCTAACAGTTAAGCTTGTCCGAGCTTTCACCATGGATTCTAAAGATTCAGCTATTTTTGAGAGTAAGGAGCTCCAGTATGAGCCAACAAGTGGACTTCATGTCTTGGATGTTTTCTCAAAGAATTTGGATGTGGGAACATGTGTGTTTGTTTTTGAGATGGTCCTTGAAGATTTGAATGGAAGAAGTGATTATGCTACTGGAGGGCAAATTCATGTACCAATATACATCACTGGGGTTATTAAAGTTGGCAATGCTGAAATCTCAGTTCTGGACAGTGATCTTGGAAGTATTGAGACCCAGAAAACGCTGGATTTGGCTGGGAATGGTGTAGTTTCACTATCAGCTAACCACCTTGCAAAGCTGCGTTTGTCTTTTCAACTGAGGACCCCTCATGGTCATGCTTTTAATCCTCAACAGGCATTTCTCAAGTTGAGACACGAAACAAAGGTTGAGCACATATTTGTGGTTGGAAATACAGGCGGGAAGTTTGACATCATTCTAGATTTTCTTGGCTTGGTGGAGAAATTTTATTATCTCTCGGGCAGATATGACATTGAGCTTACAGTCGGAGATGCTGTCATGGAAAACTCTTTCTTGCGACCTCTTGGCCATGTTGAATTAGATCTTCCAGTAGCTCCAGAGAAGGCAGCTCGTCCTCCTCCCCCACTTGTAGACCCTTACTCAAGATATGGGCCCAAATCAGAGATAATCCACTTATTCAGGGCTCCTGAAAAGCGACCAACCGAGAAATTGTCTCTTGCTTTCTTGAGTTTGACCCTTCTGCCATTTGTTGGCTTTTTGATTGGGCTTTTACGCTTAGGAGTGAATCTGAAGAATTTCCCTTCTGCAACAGTACCTGCTATATATGCCATCCTCTTCCATGTTGGCATTGCTGCAGTTCTGTTACTTTATCTATTTTTCTGGTTGAAGCTGGACCTGTTCACCACACTGAAAACACTAGGTGTTCTGGGAGCCTTTTTGATGTTTGTGGGACACAGAATTCTATCTCATCTGGCTTCTACATCAGCCAAGTTGAAGTCTGCCTAA 2148 0.4218 MPIETPVSVSGSLSRSHRLQSARRMARNLGGFLVLFLALSICQAATNFEPISDSHRSAALELFSPIDGSFASLEDTYEALRVFEILAIEEKPDVGTTTCQKVLENLGSSSPPKDLFYALKVNSLLRCGVNEEVFKDIASRLKATINDASALLEIYYSLGSLVLIKDHASNVDVLLADADGTFQSIKALSQSDGRWRYSSDNPDSSTYAAGLALEALAGVLSLASLEIDQSRINTVKKDILKLFDSIEKYDDGTFYFDEKIVGTQEHLGSLKTTASVVRGLTAFAAVISGKINLPGDKILGLAKFFLGIGIPGDAKDFFYQVDSLAFLESNRVSIPLILSLPATVYSLTHKDQLKVRVNTVLGSAAPPLTVKLVRAFTMDSKDSAIFESKELQYEPTSGLHVLDVFSKNLDVGTCVFVFEMVLEDLNGRSDYATGGQIHVPIYITGVIKVGNAEISVLDSDLGSIETQKTLDLAGNGVVSLSANHLAKLRLSFQLRTPHGHAFNPQQAFLKLRHETKVEHIFVVGNTGGKFDIILDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHVELDLPVAPEKAARPPPPLVDPYSRYGPKSEIIHLFRAPEKRPTEKLSLAFLSLTLLPFVGFLIGLLRLGVNLKNFPSATVPAIYAILFHVGIAAVLLLYLFFWLKLDLFTTLKTLGVLGAFLMFVGHRILSHLASTSAKLKSA 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3088 715 Pfam Oligosaccharyltransferase subunit Ribophorin II 33 707 IPR008814 GO:0006487|GO:0008250|GO:0016020
Dere01g3088 715 PANTHER RIBOPHORIN II 34 714 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3088 Dere-ChrDere01 45395919 45403956 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3088 01 45395919 45403956 Dere02g0815 02 7682785 7689592 CCT
Dere01g3088 01 45395919 45403956 Dere01g3088 01 45395919 45403956 ECH