Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3081 ATGAACATCTTCACCAAGAAACCCACGGCCAAAGAGGCTCTTCGGGAGAGTAAGCGAGAAATGACAACTGCTACTCGAGGAATAGAGAAGGAAATTGGAGCATTACAATTGGAAGAAAAAAAACTTGTTGCTGAAATCAAGAGAACTGCTAAAACTGGAAATGAGGCAGCAACTAAAATCTTAGCTCGCCAGTTGGTTAGGCTTAGGCAACAAATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATTGCAACTCACACACAGGCAATGTATGCCCAATCTTCAGTTGCTGTTGGTATGAAAGGTGCTAGTAAGGCGATGGCAGCTATGAATAAGCAAGTGGCACCTGCAAAGCAAGCAAAAGTTGTACGGGACTTCCAGAAGCAATCAGCACAGATGGATATGACTACTGAAATGATGTCAGATGCCATAGATGATGCCTTGGATAATGATGAAGCTGAAGAGGAGACTGAAGAGCTCACTAATCAGGTGCTTGATGAAATTGGTGTGGATGTTGCCTCACAGTTGTCAGTGGCTCCTAAAGGAAGAATTGCGACCAAGAGCACTGAAAATGCCAGCAGCTCGGGCATTGACGATCTTGGGAAACGTTTAGCGGCTCTAAGAAACCCATAA 639 0.446 MNIFTKKPTAKEALRESKREMTTATRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRAQMRGIATHTQAMYAQSSVAVGMKGASKAMAAMNKQVAPAKQAKVVRDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEELTNQVLDEIGVDVASQLSVAPKGRIATKSTENASSSGIDDLGKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3081 212 Gene3D - 4 180 - -
Dere01g3081 212 MobiDBLite consensus disorder prediction 182 212 - -
Dere01g3081 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
Dere01g3081 212 Pfam Snf7 16 184 IPR005024 GO:0007034
Dere01g3081 212 MobiDBLite consensus disorder prediction 1 22 - -
Dere01g3081 212 MobiDBLite consensus disorder prediction 183 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3081 Dere-ChrDere01 45349986 45352914 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3081 01 45349986 45352914 Dere01g3081 01 45349986 45352914 ECH