Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3053 ATGGGTATGGTCAGAAAATCTTCTTCTCTCCCCTCTTTGTTTCTCTTCACTGTTTTCGCGGTCTTTCTCTATCGTATTTCAGCTACGGATAACACAGACTTGGTTTATAAGGGCTGTGCAGACCAGAAATTGCAAGACCCATCTGGGATTTACTCACAGAACCTCAAATCCCTATTGGGTTCTCTCGTTCCACAATCTGCACAAAAGACTTTCTCCTCCACAACCTCCGGCGAAGGCCAGAATGCGATCACGGGGTTGTACCAATGCAGAGGAGACCTCTCAAATTCCGAGTGCTACAATTGCGTCAGCAAGATTCCCGATATGCTGGACAAGCTCTGTGGCCAGGTGGCGGCGGCGCGTGTCCAGCTCAATGGTTGCTATTTGCGTTACGAGATCGTTGGGTTCAAGCAGGTCTCTGGGACTCAGTTGCTATACAAGGTTTGTGGGTCGATTCAGGCGAGCGGAAGTGGGTTCGAAGAGAGAAGAGACGCAGCGTTTGGGATGGTGGAAAACGGAGTGAAAAGTGGAGGAAATTTGTTTTACACAGGAAGCTACCAGTCGCTGTATGTGTTGGGGCAATGTGAGGGTGATTTGGCTAATGATGATTGTGGGGATTGTGTGCAGAGCGCTGAGGACCAGGCTAAATCTGTGTGTGGAGACTCAATTTCTGCCCAAATTTATCTTCAAAAGTGCTATATCAGCTACAGCTTTTATCCCAATGGAGTGCCTAGCATGTCATCTTCTTCCTCAGGGACGGGGCAACACAACACACAGAGGACAGTGGCTCTTGCCGTAGGAGGGGTTGCGGCTCTGGGGTTCTTAATTGCTTGTTTGTTATTTGTCAAATCAGTGTTGAAGAAACGAGGTGATCGGTTGGATTCAATTTGTGGTATGAATGGAGGAAGTGATGTGTGGGACAGGAGTTCATTGGGTGAGATGTGA 942 0.483 MGMVRKSSSLPSLFLFTVFAVFLYRISATDNTDLVYKGCADQKLQDPSGIYSQNLKSLLGSLVPQSAQKTFSSTTSGEGQNAITGLYQCRGDLSNSECYNCVSKIPDMLDKLCGQVAAARVQLNGCYLRYEIVGFKQVSGTQLLYKVCGSIQASGSGFEERRDAAFGMVENGVKSGGNLFYTGSYQSLYVLGQCEGDLANDDCGDCVQSAEDQAKSVCGDSISAQIYLQKCYISYSFYPNGVPSMSSSSSGTGQHNTQRTVALAVGGVAALGFLIACLLFVKSVLKKRGDRLDSICGMNGGSDVWDRSSLGEM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3053 313 Pfam Salt stress response/antifungal 156 237 IPR002902 -
Dere01g3053 313 Pfam Salt stress response/antifungal 46 131 IPR002902 -
Dere01g3053 313 ProSiteProfiles Gnk2-homologous domain profile. 140 240 IPR002902 -
Dere01g3053 313 Gene3D - 30 135 IPR038408 -
Dere01g3053 313 Gene3D - 141 239 IPR038408 -
Dere01g3053 313 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Dere01g3053 313 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 284 - -
Dere01g3053 313 FunFam cysteine-rich repeat secretory protein 3 141 239 - -
Dere01g3053 313 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3053 Dere-ChrDere01 45057710 45059372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3053 17 239 Receptor kinase-like Gene Family AT4G05200 26.778 2.41e-17 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3053 01 45057710 45059372 Dere01g3053 01 45057710 45059372 ECH