Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3040 ATGGACACAAAAGAAGATGGTGAATCCCGTGATGATCAGGGCTCGTCGCCAATGGCGGCCCTGCAGCTGTTGTCTGGGGAGACTACCGGAGTTGCTGGGGATGATTCAGGCATTCCACCACAGGTGTTTTCTGGACATAGACGATGTCAAAGTGAAGTTGTGACCGCAGGAATGAAACGGAGTGATAGCTATCAGAAGTTAAAGACTCATGTGCAGAAGGCTTGGCGGTGGGGCAGCAAATCCCGTGAAGAAGGCTCCCCTTCGACTTTTAACCCTGAGGTCTTGGCAAACCAAAAGCGTCAGTGGTATCAGCTTAATTCCAAAACCCTGGATTGTGTAAATTATAAGGAGCCGACCTCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCTGATGCAAATCTGGAAGCTGTGGAGGATGCATTTGCAAATAGGAAGAAGTGGGAAAAAGAGGGAAATTTTGAATCTGTAGACTTCCAGATGCTGCACCAACATGGGTCTCCAGTACCAACATTGGAACCTCAGATTCTTTTCAAATATCCTCCTGGGAAGAAGCTGACAATGCGTATGAAGGATTTAGCCTCTTTTTGCTTTCCTGGAGGCGTTAAGGCATCATTGTTGGAGAGGAGTCCATCTCTAAGTGAACTGAATGAAATTGTGTATGGACAGAAGCATTTAGGCAGAGATGATTTGTCATTTATTTTTTCACTCAAGGCAGCAGAAAATGCAACACTTTATGGGGTCTGCTTGCATGTGCCTGAAATTGTACAGCGGCCCCCTGGTATCTTAGGCATATCATCTCCTCTTTCTCTCCGCTCCGGGGTATGCAGCCGTTTTCTGGTTTCTGCTCCTCGTTGTTACTGTCTGCTGACTAGAGTTCCTTTCTTTGAGTTACATTTTGAGATGTTAAACAGATCCTATAAAATTCACTATGCCTTACTTGGATGCAGTCTTACTGCACAGGAGCGTTTGAATCGGATAACTCAATTTGTAAACAAAATGACTCTTACTGGTTCTTTTCTGTCGCCCAAACTGGATGATCAAATGAGTGAAAATGATGACTCCCCAGACAGGGAGTCATTCAGTGATTGGATGGCTTGTGCAATACCTGTTGAAAATGCTGCAGTCATTGCTGCTGCTGCTGCAGGAATTATATCTGACGATGAAATCTCAGCCAAAATGTGGGATCCTGAGTCCCCAGGAAGTATGACTGCCAGTGAGGCTTCGGATTTTAGCCAGGTCAGGGACATAGATAAGGATGGCAGGAAAAGTCATGATGGTTGTGCTTCTGAGGCACCACAAACCCATACAAATTCTTTGGAAAGAATATCTGGAAACTATGAAAATGATCAAGCTTCTCCAGAGGCTGGAACACCTTTATCTTCTAGGAGTCGTGCATTGGAGCGTCTTGGGGGTTCTCAGTCACCTTTCAGGAGTCCTGTCAGAAGCATGGTGTCAGAAGATGAGGATGATCTTTTTGCAAATGATGAATATGGGGATGAATTGTTAATGGAGTGGGCTAGGGAAAATAAGAATGACTTGCTACAGATAATGTGTCGGTATCATACTCTACCTCTTCCACGTCGAGGCAGTGAATTTATTTTCCACCCTCTCGAACATCTTCAGCCTATTTTGTATAGAAGACCTTCAGTAGTTGCTCTTGGCTTTCTTGAAAATTGTCTAAATTGTTTTGAACCTGCCAAGGTCAATGCAAAATTGGCTGCTGCTGAGGAAGCCCTTGCATTTTCGATATGGGCAACTGCAACTATTTGTCGAGTTCTGTCCCTTGAAAGTCTGTTGGCAATAATTGCTGGAGTGTTGTTGGAAAAACAAGTGTTAGTGGTGTGTCCAAATCTGGGTGTTCTATCTGCTGCAGTGCTATCTCTTATTCCCATGATTCGTCCGTTTCAGTGGCAGAGTTTGTTTCTCCCTGTTCTACCCCAGAGAATGTTTGATTTTCTTGATGCACCAGTTCCATATATTATTGGCATACAGCATAAGCCGGCTGATTTGAAGATAAAAACTTCTAATCTCGTTCTTGTTAATATACTTAAGAATCAGGCGAAAATGTGTTACATGCCAAGACTTCCGCAGCATAAAGAGCTCATCTCTCAGTTAGGTCCATTTCATGCTAGACTTTCAAGTGAAAGTTCAATTGCTGAAAGGCATCCTGTATATAGGTGCAACGAAGTCCAGGCTGAAGCTGCAACTCACTTTTTGAATGTCATGGGAAGATACCTGGAATCACTTTGTGCAGATCTGAGATTACATACAATCACTAGTGTACAATCAAATAGTGATAGAGTTTCTTTGCTTCTTAAAGATAGCTTTATTGATTCCTTCCCTAGCAGGGACCGGCCGTTCATTAAGCAATTGGTTGACACACAGCTCTTCAGTGTTCTATCAGACTCGCGTCTATCAAGCTTCGAGAATGACTCATATTTCTCTGACACTTCATTCTAG 2466 0.4359 MDTKEDGESRDDQGSSPMAALQLLSGETTGVAGDDSGIPPQVFSGHRRCQSEVVTAGMKRSDSYQKLKTHVQKAWRWGSKSREEGSPSTFNPEVLANQKRQWYQLNSKTLDCVNYKEPTSLFEHFVIVGLHPDANLEAVEDAFANRKKWEKEGNFESVDFQMLHQHGSPVPTLEPQILFKYPPGKKLTMRMKDLASFCFPGGVKASLLERSPSLSELNEIVYGQKHLGRDDLSFIFSLKAAENATLYGVCLHVPEIVQRPPGILGISSPLSLRSGVCSRFLVSAPRCYCLLTRVPFFELHFEMLNRSYKIHYALLGCSLTAQERLNRITQFVNKMTLTGSFLSPKLDDQMSENDDSPDRESFSDWMACAIPVENAAVIAAAAAGIISDDEISAKMWDPESPGSMTASEASDFSQVRDIDKDGRKSHDGCASEAPQTHTNSLERISGNYENDQASPEAGTPLSSRSRALERLGGSQSPFRSPVRSMVSEDEDDLFANDEYGDELLMEWARENKNDLLQIMCRYHTLPLPRRGSEFIFHPLEHLQPILYRRPSVVALGFLENCLNCFEPAKVNAKLAAAEEALAFSIWATATICRVLSLESLLAIIAGVLLEKQVLVVCPNLGVLSAAVLSLIPMIRPFQWQSLFLPVLPQRMFDFLDAPVPYIIGIQHKPADLKIKTSNLVLVNILKNQAKMCYMPRLPQHKELISQLGPFHARLSSESSIAERHPVYRCNEVQAEAATHFLNVMGRYLESLCADLRLHTITSVQSNSDRVSLLLKDSFIDSFPSRDRPFIKQLVDTQLFSVLSDSRLSSFENDSYFSDTSF 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3040 821 Pfam uDENN domain 175 253 IPR005113 -
Dere01g3040 821 Gene3D - 585 749 IPR043153 -
Dere01g3040 821 MobiDBLite consensus disorder prediction 431 461 - -
Dere01g3040 821 SMART DENN_cls 283 687 IPR001194 -
Dere01g3040 821 MobiDBLite consensus disorder prediction 419 486 - -
Dere01g3040 821 ProSiteProfiles Tripartite DENN domain profile. 156 813 IPR037516 -
Dere01g3040 821 Gene3D - 110 334 - -
Dere01g3040 821 Pfam DENN (AEX-3) domain 590 685 IPR001194 -
Dere01g3040 821 MobiDBLite consensus disorder prediction 1 44 - -
Dere01g3040 821 MobiDBLite consensus disorder prediction 394 413 - -
Dere01g3040 821 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 56 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3040 Dere-ChrDere01 44925805 44935534 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3040 01 44925805 44935534 Dere01g3040 01 44925805 44935534 ECH