LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g3032	ATGCTAGTCCTTGAGCGAGGCCCAGAACCCCAAAATTGCTCATTAATGGAGAATCTGTTTCACCTAGTTGATCACGAAGACTTGTTCTCTCGCCGCTGCATTTGGGTGAATGGCCCTGTGATCGTCGGAGCAGGCCCGTCGGGGCTAGCCACTGCTGCTTGCCTCAGAGAGCAAGGTGTCCCCTTCATGGTTCTCGAAAGAGCCGACTGCATAGCCTCTCTCTGGCAAAAGCGAACCTACGATAGGCTCAAGCTTCACCTTCCCAAACAATTCTGCCAGCTTCCCAAACTTCCATTTCCAGAAGACTTCCCTGAGTACCCCACAAAGCGACAATTCATCGACTACCTCGAATCGTACGCCAAGCGTTTCGAGATCAACCCGCGTTTTAACGAGTGCGTTCAATCCGCTAGGTATGACGAGACCAGCGGGTTGTGGCGGGTGAAGACCGTTTCCACTACTGGGTCGACAAGGGCAGAGGCCGAGTACATCTGCCGGTGGCTCGTGGTGGCCACCGGCGAGAATGCCGAGTATGTCATGCCTGATATCGAGGGGTTGGCCGAATTCAAAGGTGAAATCATTCATGCATGTGATTACAAGTCCGGGGAAAGTTTCAGTGGAAAGAAAGTGCTCGTTGTGGGGTGTGGCAATTCTGGCATGGAGCTCTCGCTTGACCTCTTTAACCACAATGCGTCACCTTCAATGGTCGTTCGTAGCTCCGTTCATGTATTACCCAGAGAGATTTTCGGGAAATCAACATTTGAATTGGCTGTTATGATGTTGAAATGGCTACCTCTTTGGCTTGTTGACAAGCTGCTATTGATTCTTGCATGGTTGGTGCTGGGTAACGTTGAGAAGTATGGGCTAAAAAGGCCATCGACGGGTCCAATGGAGCTGAAAAACACAAAGGGGAAGACCCCTGTTCTGGACATCGGGGCATTAGAGAAGATTAGATCAGGAGACATAAAAGTGGTTCCCGGGATTAAAAGGTTTAACAATCGCCAAGTTGAGCTCCTTAATGGTGAAAAGCTTGATATTGATGCTGTCTTATTTGCCACAGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGAGGCCATTCCCACATGGGTGGAAAGGAAGTGCAGGGCTATATGCAGTTGGGTTTACAAGGAGAGGGCTGTCTGGTGCTTCATCTGATGCCATGAAAATTGCTCAAGATATTGGCAAAGTGTGGAAGGAAGACACTAAGCAAAAGACCCACAGAACTACTGCTTGCCATAGACGATGCATTTCCCAGTTCTAA	1317	0.4913	MLVLERGPEPQNCSLMENLFHLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKRQFIDYLESYAKRFEINPRFNECVQSARYDETSGLWRVKTVSTTGSTRAEAEYICRWLVVATGENAEYVMPDIEGLAEFKGEIIHACDYKSGESFSGKKVLVVGCGNSGMELSLDLFNHNASPSMVVRSSVHVLPREIFGKSTFELAVMMLKWLPLWLVDKLLLILAWLVLGNVEKYGLKRPSTGPMELKNTKGKTPVLDIGALEKIRSGDIKVVPGIKRFNNRQVELLNGEKLDIDAVLFATGYRSNVPSWLQEGEFFSKNGYPKRPFPHGWKGSAGLYAVGFTRRGLSGASSDAMKIAQDIGKVWKEDTKQKTHRTTACHRRCISQF	438

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g3032	438	Pfam	Flavin-binding monooxygenase-like	41	359	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Dere01g3032	438	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	38	60	-	-
	Dere01g3032	438	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	204	228	-	-
	Dere01g3032	438	Coils	Coil	435	438	-	-
	Dere01g3032	438	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	202	373	IPR036291	-
	Dere01g3032	438	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	40	432	-	-
	Dere01g3032	438	PRINTS	FAD-dependent pyridine nucleotide reductase signature	208	226	-	-
	Dere01g3032	438	PRINTS	FAD-dependent pyridine nucleotide reductase signature	39	58	-	-
	Dere01g3032	438	FunFam	Flavin-containing monooxygenase	39	421	-	-
	Dere01g3032	438	SUPERFAMILY	FAD/NAD(P)-binding domain	40	246	IPR036188	-
	Dere01g3032	438	Gene3D	-	39	422	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g3032	Dere-ChrDere01	44796298	44798219	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere01g3032	01	44796298	44798219	Dere01g3032	01	44796298	44798219	ECH