Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3003 ATGGCATCTGCAATTGCCCGCGACGAAGAGACGCCACTGGTTGCTGTTGCTGATAATTTGCCAATTCCAACTCCCAAAAACCATACGAAGGATATTCATATCTTGAGCGTGGCGTTTCTGTTGATCTTTCTGGCCTATGGAGCTGCCCAGAACTTGCAGAGTACTCTGAACACTGAGCAGGACTTGGGTACGACTTCCCTTGGGATATTGTACTTGTCTTTCACATTTTTCTGCCTGGTTGCTTCTTTGGTTGTTCGGGTACTCGGGTCAAAGAAAGCTTTGGTTATAGGGACAACTGGTTATCTGTTGTTCGTAGCTGCGAACTTGAAGCCCAATTGGTATACAATGATTCCTGCCTCTTTGTATCTTGGATTTAGTGCTTCAATCATATGGGTTGGACAGGGAACATATCTTACTTCAGCTGCACGTAGCCATGCTAAAGATTACAATTTGCATGAGGGAGCAGTGATTGGTGACTTCAACGGGGAATTCTGGGCAGTGTTTGCACTCCACCAGTTCGTTGGAAATCTCATTACATTTGCTTTACTGAGAGATGGACAGGAGGGAAGTACCAGTGGGACAACTGTATTATTCATTGTATTCCTTAGCGTTATGGCCTTTGGTGTAATACTTATGTGCTTCTTGAACAGAAGGACTGGTAATAATGAGGGAGAAGAGGAGCTATTAGATGCTGGTGTTGGTGTCTCTTCATTTCTGAAGTCTCTATCTAAATCACTTACCAATTTGTTGTCTGATGTAAGAATGTTGTTGATCATTCCCCTCATTGCATATTCAGGAGTGCAACAAGCATTTGTGTGGGCTGAATTTACCAAGTATGTTGTAACTCCAGCACTTGGCATTTCTGGTGTCGGGAGTGCAATGGCAGTGTATGGGGCTTTTGATGGAATATGTTCTCTGGCTGCTGGTCGACTTACCTCTGGTCTTACATCTGTTACGTTAATAGTTTCTGTTGGAGCTTTTGTTCAGGCAGTTGTAGTTGTCCTGCTTCTATTAAATTTGAGTGTAAGTAGTGGATTCCTCGGTACTCTGTACCCACTTTTCATGGCTGCTTTGTTGGGCATTGGTGACGGAGTTCTTAATACACAGCTCAGTGCTTTGCTTGGAATGCTATTCAAGCATGACACGGAAGGAGCATTTGCACAGCTGAAGATATGGCAAAGCGCTACAATTGCTATCATGTTCTTTTTAAGCCCACACATCTCCTTCCACGCAATGCTTGTGATTATGCTTGCTTCGCTGTGCTTCTCATTTGGCGGTTTTCTATTGCTAACTCTCAAGGTAGCTAAGGCATATTCCACTACCAGCGAGTGA 1332 0.4392 MASAIARDEETPLVAVADNLPIPTPKNHTKDIHILSVAFLLIFLAYGAAQNLQSTLNTEQDLGTTSLGILYLSFTFFCLVASLVVRVLGSKKALVIGTTGYLLFVAANLKPNWYTMIPASLYLGFSASIIWVGQGTYLTSAARSHAKDYNLHEGAVIGDFNGEFWAVFALHQFVGNLITFALLRDGQEGSTSGTTVLFIVFLSVMAFGVILMCFLNRRTGNNEGEEELLDAGVGVSSFLKSLSKSLTNLLSDVRMLLIIPLIAYSGVQQAFVWAEFTKYVVTPALGISGVGSAMAVYGAFDGICSLAAGRLTSGLTSVTLIVSVGAFVQAVVVVLLLLNLSVSSGFLGTLYPLFMAALLGIGDGVLNTQLSALLGMLFKHDTEGAFAQLKIWQSATIAIMFFLSPHISFHAMLVIMLASLCFSFGGFLLLTLKVAKAYSTTSE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3003 443 CDD MFS_unc93_like 32 433 IPR044771 GO:0055075
Dere01g3003 443 Pfam Ion channel regulatory protein UNC-93 61 423 IPR010291 -
Dere01g3003 443 Gene3D MFS general substrate transporter like domains 28 224 IPR036259 -
Dere01g3003 443 PANTHER UNC-93 RELATED 26 438 - -
Dere01g3003 443 SUPERFAMILY MFS general substrate transporter 21 431 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3003 Dere-ChrDere01 44569284 44572736 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3003 01 44569284 44572736 Dere01g3003 01 44569284 44572736 ECH