Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2959 ATGAATGTGGTGGGCAAAGTTGGAAGCCTGATTACTCAAGGTGTCATCTCAGTTGCCATCCCTTTTCACCCCTTTGGTGGGGCTATTGATGTGATTGTTGTTCAGCAACAAGATGGCACATTTCGAAGCACACCTTGGTATGTTCGTTTTGGTAAATTCCAGGGTGTTCTTAAAGGTGCTGAAAAGATTGTTCGTATAAACGTTAATGGCGTTGAAGCAAACTTTCACATGCATCTTGACAATTCAGGGGAGGCCTATTTTGTAAAGGAGGTGGACGATGACAAAGGAACTCAGTCAAATGGGGTGGTTAATGATTCTAATAACTCTGAATTTACTCAAGACGACATTTTTGATGATGTTCATGGTCATAGACTTGATCATAGCATCTCTGATTTAGGGGTGCTTCAGTTGAAAGGTGAAGATGACTCCTTTGATGTGCCTCAAATTCAAAGGGCAGAATCTGATGTGCCTCGAATTCAAAGGTCTGAATCTGATGTTGATTACAAATATTATGAATTCCAAGATGAGTCTTCTTTTGACGGTTCAGCTGAGTTGTCAGAATATGGGTCTAATCAGTACGAGAATTTAGATGGAGAAAAAATTGTGAATTCACAGGGTTCCCATCCAGAGGTTGTCTTGGTGAGTGTGGACGGTCACATATTGACGGCCCCAATCTCTGAATTAGAACAGAATACAGAGAATTTGGAGTTAGAAACTCCTCAATTTCACCTGGGCCCAGGGGAAGGGACTGACTTTTGTGAAGGCAATGAGGAGTTTAGTTCTGGTGAAAATGCTTGGGCTGCTGATTATCTAAGTCAGCTGGACACTACAACAGCTGATGTTCCATCCAGTAGTTGTTGCCCCATCACTGGTGGTGACAATGTTTCTTTGCTCCAGCTGGAAGTTTGTCCAGGAGAGGACAGCCATACTTGTCAAGCACAGGAAGCTTTGACAAGTAAAAATCAAGAGGATCTTATTACACAAACTGCTTCGGAAGAGGTTGTATCCAGTATCAAGAAGGATAATGTTTTGAAAAGTTGTTTTGAGCTGCAGGAATATACTCCGCGTGTTGGAAATACTGATTTACCAGATCAAGGTTCCTCATTGGAGGTTCAAAAGTTAGCAGAGGACTCTAATGCAAATTGTCTAGTAATTGATGAAAATGAACAAAGAAGCATTGTACAATCTGAAAACATCAACAAGTCATCTTCCTCTAGTGGATCTGCTTCTTCTGATTGCAACAGATCTCAAAATTTAGAATTGGGAGTTCAGGAGGTTGAAAACAAAGCTTTGGTTGAAGAGGTAGACTATAGTAAAGGAGCCCCTTCACTTGAAAATGAAAGTAATAAAAGTGATGTAGTGGAATCTCAAGCAGAAACCTCCGATGAAGGGGACCAAAATCATTCAGCATTTGAGATTTCACTTTGTGGTCATGAACTTAAGGCAGGTATGGGGTCAGTTGCTGCTGCCAAAGTGTTTGAAGCACATCGGATATCTGCAGAGGAATTTAAAATTTCTGCACCATTCCTAATTAAGAATGAAAATCTCATTATTAAGTTTAGAGAGAGCTACTTGCCATGGGAAAAGGCTGCTCCCCATGTTCTTGGAATGGCTGCATTTGATTTAAATATACCCTTTGAGCACAATGATGCAATTCCTGTTGAACAGGATGGTGCTCTGAAGTCTAGGGACAATGACCTCAGATCTACTTCATCTGGACGCAGATGGAAACTCTGGCCTATTCCTTTTCGAAAGGTCAAAACACTAGACCGCAGTAGTAGTAACTTATCCAATGAAAATGAGGTTTTCGTAGATTCTGAGTCCGGTTTTCAGAATTCTCCCATAGCATCAACTCCAGCATCTAGCAACTATAAACCTCCTCACAAACAATTCAAAAGGACGAATGTTCCTACTAACCAGCAGATAGCATCTTTAAATCTGAAGGAAGGTCAAAATTTGGTGACCTTCAGTTTCTCAACTAGAGTTCTTGGAACACAACAGGTTGATGCACATATTTACTTATGGATGTGGAATGCAAAAATTGTAATTTCAGATGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAGTTCATGCCCTTAGTTGGCAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTGTTTCTAAGTGCTCGTGCAATTGTCCAGGCATATCTAACCAGAAGCTTTTTGCTTAACCTGAAACAGGATGGAAAAACATTACCAAATGGTCCTGTTGTTATTTCACCTGATGGATTATTTCCCTCACTCTTCCGAGAAGGTGAGGACATTAAAAGACTTTTCCCTTCCGATCATAATCCATTTTATGCGGGATTTGGCAATAGAGACACAGATGAAATTAGTTACAGGAAGATTGGAATTCCAAAGGGCAAAATATTTATTATTAATCCTAAGGGTGAGGTGGCTATAAGTCATCGTATTGATGTGAAATCATATACGTCATTACACACCCTCGTTAATGACATGTTTCCCCCTACTTCTTTGGTTGAGCAGGAGGACTTCAACTCGTGGAATTATTGGAAGCTGGCATTGCCAGAAATTGATTAG 2607 0.4058 MNVVGKVGSLITQGVISVAIPFHPFGGAIDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMHLDNSGEAYFVKEVDDDKGTQSNGVVNDSNNSEFTQDDIFDDVHGHRLDHSISDLGVLQLKGEDDSFDVPQIQRAESDVPRIQRSESDVDYKYYEFQDESSFDGSAELSEYGSNQYENLDGEKIVNSQGSHPEVVLVSVDGHILTAPISELEQNTENLELETPQFHLGPGEGTDFCEGNEEFSSGENAWAADYLSQLDTTTADVPSSSCCPITGGDNVSLLQLEVCPGEDSHTCQAQEALTSKNQEDLITQTASEEVVSSIKKDNVLKSCFELQEYTPRVGNTDLPDQGSSLEVQKLAEDSNANCLVIDENEQRSIVQSENINKSSSSSGSASSDCNRSQNLELGVQEVENKALVEEVDYSKGAPSLENESNKSDVVESQAETSDEGDQNHSAFEISLCGHELKAGMGSVAAAKVFEAHRISAEEFKISAPFLIKNENLIIKFRESYLPWEKAAPHVLGMAAFDLNIPFEHNDAIPVEQDGALKSRDNDLRSTSSGRRWKLWPIPFRKVKTLDRSSSNLSNENEVFVDSESGFQNSPIASTPASSNYKPPHKQFKRTNVPTNQQIASLNLKEGQNLVTFSFSTRVLGTQQVDAHIYLWMWNAKIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNLKQDGKTLPNGPVVISPDGLFPSLFREGEDIKRLFPSDHNPFYAGFGNRDTDEISYRKIGIPKGKIFIINPKGEVAISHRIDVKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWKLALPEID 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2959 868 SMART lns2 681 824 IPR031315 -
Dere01g2959 868 Pfam LNS2 (Lipin/Ned1/Smp2) 635 844 IPR013209 -
Dere01g2959 868 MobiDBLite consensus disorder prediction 437 468 - -
Dere01g2959 868 PANTHER LIPIN 1 868 IPR026058 -
Dere01g2959 868 SUPERFAMILY HAD-like 673 810 IPR036412 -
Dere01g2959 868 MobiDBLite consensus disorder prediction 394 415 - -
Dere01g2959 868 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 471 579 IPR031703 -
Dere01g2959 868 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2959 Dere-ChrDere01 44123279 44128566 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2959 01 44123279 44128566 Dere02g0932 02 8917468 8923578 CCT