Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2934 ATGTCGATCGCTTGTCTCAGCTCCGTCTTCTTGTCCCGATTCGATCGCCGCAGCTCGAATTTTTCTCGTGCTCTTGTAATTCCAATGGCGGCCATAACCCGCCTGTTACGACCCACATCCTCCATTTCTTACTTGGCGAGGAGATGCTTATCGTCATCTGCTGCATCCGGTGCAAAGTGTCACGCGCCTCCGTACAATTCCCCGTCTATCAATTTGAAACCCCAGGTTTCACGTAAAGATCCGAAGGACAGGAATGTCCAGTGGGTCTTCTTAGGTTGCCCAGGCGTCGGCAAAGGCACATACGCTAGCCGCCTCTCTAATCTGCTTGGCGTTCCTCACATCGCCACCGGTGATCTCGTTCGCGAGGAGCTCGCGTCCTCTGGCTCCCTTTCTGCCCAGCTGTCAGAAATTGTAAACCAAGGTAAATTGGTCTCAGATGAAATTATAATTAGTTTATTATCAAAGAGACTGGCTGCTGGCGAAGCTAAAGGCGAATCAGGATTTATTCTTGATGGTTTTCCTCGGACAATTAGGCAAGCAGAAATATTGGAAGGGGTAACTGATATTGACTTGGTAGTCAATCTGAAGCTCCGAGAAGATGTACTTCTTGAGAAATGCCTAGGTAGGAGAATTTGCAGCCAGTGTGGGGGAAATTTTAACGTGGCTTCTATTGACATCAAGGGTGAGGACGGGAGTCCTGGAATTATCATGGCTCCACTTCTTCCCCCTACCCATTGTATGTCAAAGCTCATTACTCGCTCAGATGATACTGAAGCAGTAGTCAAAGAAAGGCTTCGTATATACAATGAAAAGAGTCAACCTGTAGAGGAGTTCTACCGCAGTCGAGGAAAACTATTGGAGTTTGACCTACCAGGAGGGATCCCGGAATCTTGGCCAAAGTTACTGCAAGCCCTTAATCTTGATGATTATGAGGACAAGCGGTCCGCTGCAGCATAA 957 0.4796 MSIACLSSVFLSRFDRRSSNFSRALVIPMAAITRLLRPTSSISYLARRCLSSSAASGAKCHAPPYNSPSINLKPQVSRKDPKDRNVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVREELASSGSLSAQLSEIVNQGKLVSDEIIISLLSKRLAAGEAKGESGFILDGFPRTIRQAEILEGVTDIDLVVNLKLREDVLLEKCLGRRICSQCGGNFNVASIDIKGEDGSPGIIMAPLLPPTHCMSKLITRSDDTEAVVKERLRIYNEKSQPVEEFYRSRGKLLEFDLPGGIPESWPKLLQALNLDDYEDKRSAAA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2934 318 ProSitePatterns Adenylate kinase signature. 168 179 IPR033690 -
Dere01g2934 318 PANTHER NUCLEOTIDE KINASE 74 303 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 Hamap Adenylate kinase [adk]. 86 306 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 CDD ADK 87 289 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 306 IPR027417 -
Dere01g2934 318 Pfam Adenylate kinase 91 283 - -
Dere01g2934 318 Gene3D - 73 309 IPR027417 -
Dere01g2934 318 PRINTS Adenylate kinase signature 89 102 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 PRINTS Adenylate kinase signature 253 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 PRINTS Adenylate kinase signature 168 184 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 PRINTS Adenylate kinase signature 117 131 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 PRINTS Adenylate kinase signature 270 284 IPR000850 GO:0005524|GO:0006139|GO:0019205
Dere01g2934 318 NCBIfam adenylate kinase 87 306 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2934 Dere-ChrDere01 43965063 43968208 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2934 01 43965063 43968208 Dere02g0959 02 9145049 9148920 CCT
Dere01g2934 01 43965063 43968208 Dere01g2934 01 43965063 43968208 ECH