Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2862 ATGTATTCTCCAATGCTGGTCTTCAAGAAGTTTGTCATAAACTGGGTTGACTTTCAGTCACGTTTGGGACTTAAGGTGCTGAACAGTAAAATGGAGGCAGAGATACTGAATGCTAACCACCTGCCTTCATTTCTTCATCGGTCACTTCTTGCTGTTGCACCTATGCTTATAATATCAATGGGATACATTGACCCTGGAAAGTGGGCTGCAACTGTTGAAGGTGGTGCACGATTTGGGTTTGATCTGATGGTATTCATGCTGTCTTTCAATTTTGCTGCCATCTTATGTCAGTACATATCGGCTAGGATTGGTGTAATTACTGGAAAAGATCTTGCAGAGATTTGCAGAGATGAGTATGATGCGTGGACATGCATGTTTCTAGGAATTCAAACAGAACTTTCAGTGATTATGCAAGACCTTAACATGATCCTGGGCATCGCACACGTATTAAATCTCATGTTTGGGTGGGACTTGTTCACCTGCGTCTTTCTGGCTGCTACTAGTGCTGGTTTTCACTTGCTTATTGCCATCCTTCTTGACAATGGGAAGACAAAAGTCCTGGGCCTTTTGGTTGCAGGCTTTGTATTGCTTTTCTTTGCTTTTGGAGTAGTCATAAATCGTCCTGAAATTCCAGTATCAATGAGTGGAATACTAACAAAGTTGAGTGGGGAGAGCGTGTTTGTGCTTATGAGTCTTTTGGGAGCAACTCTTGTACCCCACAACCTTTACCTTTATTCCTCTATTGTACAGTGGCATCGGGGATCAATAAACTTTTCTAAGGATGCTTTGTGTCATAACCATTTTTTGGCCATCTTTTGTGTCTTCAGTGGCATCTGTTTGGTAAATAATATGATGATGAACGCTTCAGCAAATGAGTTCTATGGTACAGGTCTCGTTTTGCTTACCTTTCAAGATGCATTATCACCAATGGAACAGGTGTTGCAGAGTCCAGTAGCTCTACTTGCCTTTTTGCTATTTTTGTTTCTTTCAAATCACACCACAGCATTGGCATGGAGTTTAGGGGGAGAAGTAGTTATACATAGTTTTTTGAAACTAGACATTCCAGGTTGGCTTCATTATGCTACAATCAGGGTGATTGCCGTTCTTCCAGCCCTTTATTGTGTTTGGAGTGCTGGTGCTGAAGGAATGTATCAACTGCTTATATTCACTCAGGTTATGGTAGCTTTGCAACTTCCATCTTCTGTGATCCCCCTTTTCCGAATTGCAACATCTAGATCGATAATGGGTGTACACAAGATCTCTCAGTTTGTGGAATTTTTGGCATTGATAGTATTTATTGGGATACTTGGCTTAAATATTATCTTTGTGGTAGAAATGATATTTGGCAGTAGCAATTGGGCAGGTTATTTGAGATGGAATGTGGGGAATGGCATGTCTGCCTCTTATTCAGTTCTTGTTAGTACTGCCTGTGTATCATTCAGTTTGATGCTTTGGCTAGCAATTACACCTCTAAAATCTGCTAGTGTCCATTTAGATGCTCCGGTGTGGAAATGTGATATGCCAGAGGCCATACTACATCCACCAATTAAGAGTCAGGAAACAGATTTAACTGAAACTAGATATCATAGAGATGAATCCCTTAAGTTGAATGAACCAACTTCAACTCTAGCAAGAGCTTTGGAGATTTCAGATGTATCAATTGCAAATTTTCATCCTGATCTACCTGAAACTTTAATGGATCCTGATCAAGAGCTTAATTTGACTACTGAAGAGGAGAATCATTCCATAGCACCATTGCCCAGCCCCCCTATGTATCTTGAAAAGGAATCAGTTTCCACATTAAGGTCAGAGGCAGTATCAACTGTTGTGAATCAGATTTCTGATGCTAGGTTGGGCACCAAAACTGAAGAACTGGAAGCTAGTGCCTCAGTTGAGAAGACTGTGGAAGTTGAGGCAGATACAAATGTTGAAAGAGACGATGATGATGGGGACTCATGGGAAAATGGAGAATCATCTAAAGTGGTTTCTGCAAGTGCCCCATCTTCAACATCTGATGGCCCAGCATCATTCAGGAGTCTTAGTGGGAAAAGTGACGAAGGCAGCAGTAGCATTGGAAGTCTATCAAGATTAGCAGGCTTAGGACGTGCAGCAAGGCGTCAGCTAGCTGCTATTCTTGATGAATTCTGGGGACAACTGTATGATTACTATGGACAAGCAACCCAGGATGCAAAGGCTAAGAAACTGGATGTTTTGTTGGGAGTAGATTTGAGTTTTTCTGGTTCCATGCCTAAAGTGAATGCATCTGGAAAGGACTCTTCTGAGTTCTTAGTATCTGTAGGAATTAGAGCATCAGATACTCTAATGAACTCTGGCCTATATGACTCTCCCAAGCAGCCCAGGATGCAAAGTAATTTCGAGTCACCTTATAGCCTTCAAAGTAGTTCTTCCTCTTTGCAGGCAAATCACATCCAGTTATTAGATGCATATATGCAAAACTCCAGCCACAACCTTCTTGAATCTGGTGAGAGGTGCTTTTCCAGAGTGCGCAATCTGCCTTCATCTGAGGTTTGGGATTGTCAGCCAGCAACTGTACATGGTTATCAAATTGCATCCTACATTAGTCGAGTTGGTAAAGACAGAATTCAAAATAATTTAAATGGTCAAGGGGAAGTGTCATCATTAAAATCTCCTTCAATTGCTAATACAAACCACAGGGATTCACTTGCATTTGCTTTGGGGAAAAAACTGCAAAATGGTGTTGGTGTTGCTCAACCCCCAGGATTCCAAAGCATTGCAATCTCTAGAAAATCCACCTTGCCATCTGAGAGGTCCTGCTATGATTTTGGCCTTTCGGGACCTGCTGATAATGTAGGCAGTTCTGTCAATACAAAGAAATACCACAGCTTGCCAGATATTTCAGGATATGCAATCCCCCATAGGGATGTCTATGTATCTGATAAGAATGCACCTTTTGAGGGTTCTGTTGGGTATGGGTCTGCAAGAACTTATTACAAACCATCATATTCAAATCCTCGATCAAGAACAGGAGCACCTTTGGCCTTTGACGAACTATCCCCATCGATAGTCTACAGAGGTGCCCTCTCTTCACAGTTGAGTTCTGGCATTGACACTGGGTCCCTCTGGACCAGACAGCCTTTTGAGCAGTTTGGTGTAGCAGATAAAATCCATAATATTGCAATGGAAGGTAGTGGAACTAGGCCTAGTTCAATTTCTCAAGAGACTGCTTCAGCTGTTGATATAGAGGTGAAACTTCTTCAGTCTTTTAGACATTGCATTCTGAAGCTCTTGAAATTGGAAGGGTCTGGTTGGTTGTTTAGACTGAATGGTGGGGTTGACGAGGATCTGATAGATCGTGTAGCTGCGAGGGAGGAATTCCTATATGAAGTTGAAGCTAGGGAGACAAATTCCTCTAGTTTTTCAGTGTCATCGGTTCCTCACTGTGGGGAGGGCTGTATATGGAGATCAGACTTGATAATAAGTTTTGGGGTGTGGTGCATTCACCGTATTCTTGAGCTCTCACTTATGGAGAGCCGGCCTGAGCTTTGGGGGAAATACACCTATGTACTAAACCGCCTCCAGGGTGTAATTGATCCAGCTTTTTCAAAGCCTCGTAGCGTGTTGCCCCCATGCTTTTGCCTTCATGTTCCCGCAGCGCACCAGCAGAAGTCAAGCCCTCCTCTTTCGAATGGAATGCTGCCCCCTCCACCTGCATCAAAAGCAGGCAAGGGAAAATGCACAACTGCATCAATGATGCTTGACCTCATAAAGGATGTGGAAATTGCAATCTCTAATCGGAAAGGACGCACGGGAACTGCAGCGGGTGATGTAGCTTTCCCCAGGGGAAAGGAAAATGTGGCCTCTGTTCTCAAACGCTACAAGCGCAGATTATCCAACAAAACATCTGCCACCCCACCCATGAAGTGA 3906 0.4293 MYSPMLVFKKFVINWVDFQSRLGLKVLNSKMEAEILNANHLPSFLHRSLLAVAPMLIISMGYIDPGKWAATVEGGARFGFDLMVFMLSFNFAAILCQYISARIGVITGKDLAEICRDEYDAWTCMFLGIQTELSVIMQDLNMILGIAHVLNLMFGWDLFTCVFLAATSAGFHLLIAILLDNGKTKVLGLLVAGFVLLFFAFGVVINRPEIPVSMSGILTKLSGESVFVLMSLLGATLVPHNLYLYSSIVQWHRGSINFSKDALCHNHFLAIFCVFSGICLVNNMMMNASANEFYGTGLVLLTFQDALSPMEQVLQSPVALLAFLLFLFLSNHTTALAWSLGGEVVIHSFLKLDIPGWLHYATIRVIAVLPALYCVWSAGAEGMYQLLIFTQVMVALQLPSSVIPLFRIATSRSIMGVHKISQFVEFLALIVFIGILGLNIIFVVEMIFGSSNWAGYLRWNVGNGMSASYSVLVSTACVSFSLMLWLAITPLKSASVHLDAPVWKCDMPEAILHPPIKSQETDLTETRYHRDESLKLNEPTSTLARALEISDVSIANFHPDLPETLMDPDQELNLTTEEENHSIAPLPSPPMYLEKESVSTLRSEAVSTVVNQISDARLGTKTEELEASASVEKTVEVEADTNVERDDDDGDSWENGESSKVVSASAPSSTSDGPASFRSLSGKSDEGSSSIGSLSRLAGLGRAARRQLAAILDEFWGQLYDYYGQATQDAKAKKLDVLLGVDLSFSGSMPKVNASGKDSSEFLVSVGIRASDTLMNSGLYDSPKQPRMQSNFESPYSLQSSSSSLQANHIQLLDAYMQNSSHNLLESGERCFSRVRNLPSSEVWDCQPATVHGYQIASYISRVGKDRIQNNLNGQGEVSSLKSPSIANTNHRDSLAFALGKKLQNGVGVAQPPGFQSIAISRKSTLPSERSCYDFGLSGPADNVGSSVNTKKYHSLPDISGYAIPHRDVYVSDKNAPFEGSVGYGSARTYYKPSYSNPRSRTGAPLAFDELSPSIVYRGALSSQLSSGIDTGSLWTRQPFEQFGVADKIHNIAMEGSGTRPSSISQETASAVDIEVKLLQSFRHCILKLLKLEGSGWLFRLNGGVDEDLIDRVAAREEFLYEVEARETNSSSFSVSSVPHCGEGCIWRSDLIISFGVWCIHRILELSLMESRPELWGKYTYVLNRLQGVIDPAFSKPRSVLPPCFCLHVPAAHQQKSSPPLSNGMLPPPPASKAGKGKCTTASMMLDLIKDVEIAISNRKGRTGTAAGDVAFPRGKENVASVLKRYKRRLSNKTSATPPMK 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2862 1301 Pfam Natural resistance-associated macrophage protein 68 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 46 493 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PRINTS Natural resistance-associated macrophage protein signature 391 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PRINTS Natural resistance-associated macrophage protein signature 331 350 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PRINTS Natural resistance-associated macrophage protein signature 359 376 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dere01g2862 1301 PIRSF EIN2 31 1298 IPR017187 GO:0009873
Dere01g2862 1301 MobiDBLite consensus disorder prediction 656 691 - -
Dere01g2862 1301 MobiDBLite consensus disorder prediction 621 691 - -
Dere01g2862 1301 MobiDBLite consensus disorder prediction 1217 1237 - -
Dere01g2862 1301 MobiDBLite consensus disorder prediction 621 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2862 Dere-ChrDere01 43401913 43409614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2862 31 1293 Miscellaneous Gene Families AT5G03280 53.074 0.0 1255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2862 01 43401913 43409614 Dere01g2862 01 43401913 43409614 ECH