Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2850 ATGGTTTTATATGAGCATTCAGATTTTCTTCAGTGGGGTCTTCGTCTTCTTGATGGCGACCCCAGTTACAGTCCAGGATACTATGGTGACATAAATCAACAGGATACTGGTGACACTTATGATGGACACTACTTCCATCACCATTATGATGCCGAGAGTAATGATGTAGAGAATGATGAGATTATTGCTCAGACTCTTCAAGAAGAGTTTTCACAACTGGACATTGCTGAAAGTTCCAGATATTCACAGGCAAGTGAAGAGCACTACCATGTGCCTGAACCGGCATTTGGATGGTATAACTCTTCAATGATGAACCATTGTTCAGAAGGTCATAATTATTCCCAGGAAGGAGTTGATGATGCAGAACATTCTAGTTCATGTTCTAGTCCTTGTGAAGGGGCAGAGTACTCATTAGAGCTAACTGATCCTCTTGATGATGAACTAGGAAGGAGATTGAGTCAAATGATCCCAACTCCTCATGTTCCCAGAATTAATGGAGATATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTCGAGCACAAGGTACCAGGCGATGGTAATTGTCAGTTTCATGCATTATCTGATCAATTGTATCACACACCTGAGTACCACAAGTTAGTGAGACGACAAGTTGTGAACCAGCTTAAGTCTCATCCGGAGACTTATGAGGGATACGTTCCCATGGAATATGGCGACTATTTGGAGAAGATGTCTATGAGTGGTGAATGGGGTGATCATGTCACTCTTCAAGCTGCTGCAGATTTGTACGGTGTGAAAATTTTCTTGATTACTTCTTTCAAGGATACCTGTTGCGTAGAGATACTTCCTCATGTTGAGAAGCCGAAGAGGGTTATTTTCCTGAGCTTTTGGGCAGAGGTGCATTACAACTCCATCTACCCTCAAGGAGATATACCTTCCAGTGAGTCAAGAAGGAAGACGAGGTGGTGGAGCTTTGGGAGTAAGCATTAG 1008 0.4226 MVLYEHSDFLQWGLRLLDGDPSYSPGYYGDINQQDTGDTYDGHYFHHHYDAESNDVENDEIIAQTLQEEFSQLDIAESSRYSQASEEHYHVPEPAFGWYNSSMMNHCSEGHNYSQEGVDDAEHSSSCSSPCEGAEYSLELTDPLDDELGRRLSQMIPTPHVPRINGDIPSIDEATSDHQRLLDRLQLYDFVEHKVPGDGNCQFHALSDQLYHTPEYHKLVRRQVVNQLKSHPETYEGYVPMEYGDYLEKMSMSGEWGDHVTLQAAADLYGVKIFLITSFKDTCCVEILPHVEKPKRVIFLSFWAEVHYNSIYPQGDIPSSESRRKTRWWSFGSKH 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2850 335 Pfam OTU-like cysteine protease 196 282 IPR003323 -
Dere01g2850 335 SUPERFAMILY Cysteine proteinases 177 314 IPR038765 -
Dere01g2850 335 FunFam OTU domain-containing protein 172 318 - -
Dere01g2850 335 Gene3D - 171 318 - -
Dere01g2850 335 ProSiteProfiles OTU domain profile. 190 314 IPR003323 -
Dere01g2850 335 PANTHER OTU DOMAIN CONTAINING PROTEIN 53 315 - -
Dere01g2850 335 CDD OTU_plant_OTU9-like 181 312 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere01g2850 Dere-ChrDere01 43310340 43314194 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2850 01 43310340 43314194 Dere01g2850 01 43310340 43314194 ECH