Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2824 ATGGCCGATCCTTCCGATGACTCCGTCTACGAGGATGTCGGAATTTTGGAGGCACAGATACTGGAAGGCGAAGGAGAGTATGGAGCCAGCGGAGAAGAAGATGAGGAGGAGGAGGAGGATGATGATGATAGTGAGGACGAAGAGTACATTCCACTCGTACAGTCGCCTAGGGCATTGCAAAGCGGTTCTTTTGCCTCTAATCAAGCCGGTACCATAAATTACGAGGAACCGGATAATTGCGCTGAACAAGAGGGAAACAAGCGGCGGAGGACTGAAGGAGGAGAAACTTGTTCATCTTTCGGAATTGGGGGCGCCGAGAGTAGTCAAGGGAATGAATGGAACCGTGCTGACATTGACGGCTTGTTTTGCCCTATTTGCATGGACGCTTGGACCAATAACGGTGAACATCATATCTGCTGTCTTCCATGTGGGCACATATATGGTATGTCTTGCATCAAAAGATGGCTTCAACAGCGAAAAAATTCTGGGAAGTGCCCTCAATGCAATAGGAAATGTGCATTAAGGGATGTGAGAAAACTCTATGCTTCACGGGTACTTGCAGCTGATGAAGAGTCACAGAAGAAAATTCGGTCCCTTGAGGCCAAATGCGCTATTCTCGAGAGCAAGGGCTCTGATTGGTGCAAGAAAGAATCAGTATGGCAGAAAAATGAAGCTGAATTGCATCTTGAAGTTAAGAAACTTACAGAGAAAAATGCCTATCTGGAGCGGCTGATACAAGATATGGAGAGTAGGCAAATTGGTTCCATGAACGCCACAGGGAACTGTCAATGGAGATCTGAATCCAAACACAGCTTTGGCGCAAAGGTACATGGGAAAGGACCTTACTGCAATTTTGAATTGCAGAAAGTGTTTCAGCTGGACAGTGCACGTGTATTTGATGTAGATGCTTCTAATCAAATTTTATTAATTGCACAAAGGCCAAAAGGGATAGGTGGAACTCACTTGCTAACTAAAATGAGCTTGATATCTCCATATGAGATGGAAGATATTTTACTGCCTTCCACTATAAGTGCTATTAAAGATCTCCATATTTCCCCGTTTAATGATGGCCTGGCTATTTATGCTTCATTAGGGAGGAAATTATCAGTACTCAGCATGGAGAGCAACAATCTGGTTGTCAATTATGATTTGCAGTTTCCTGCTTGGTCATGTTCATGGGATCTCAGCAATTCTCATTACATATACGCTGGACTACAGAATGGTTCTGTCTTGGTATTTGATATGCGTCAAACTGCAGGGCCTGTAAAATCTCTAAGTGGGTTGAGTAGCAACCCAGTTCATACTGTACAGTCTCTTGTACAAGATTCTAGTCTTCCTTCTGATGTTAGAACAATTCTATCTGCTTCTGCCATTGGTCTGTGTCAGTGGAACATCGATGCTGTAGAAGGGCCATGTATAATTCCTGAAACTAATAATCAAGGGGTTTGTATATCTCTTGCCTACTGCCCTAGCAGTGATGACATTGTCGTATCATATCGTCCGAAATTTGACATGTCCATTGACGGGCCTCTTTCTCAACCATCACTCACTCCTTTCCATGTTGCTGGACAAGGAGTACAGGGCTCTCATGTCTTGTTCAAAAGACTGGGTGGAAACCATTTTCAAAAATTGGGTTCCTCATGTGCCAATGTAAGTAACATTCGACTCCCAAAATGTGTAATTATGGATATAGAGAGTGAATGCCGATTGTTAGCATCTGGAGATGAAGGTACATGTGAAATGGTCTTGCAAGAGTTGCCATCTTTTGGAATTCTGCAGCGTATCAAATCACCAGAGCATGTGCGCGATCTAAAGTACTCGCCTACACTGAGCCATGGGTTACTGGGTTGTTTGACTGAAAAGTCATTGCAACTTTTCTGTACCAAAATCTCATGA 1896 0.4362 MADPSDDSVYEDVGILEAQILEGEGEYGASGEEDEEEEEDDDDSEDEEYIPLVQSPRALQSGSFASNQAGTINYEEPDNCAEQEGNKRRRTEGGETCSSFGIGGAESSQGNEWNRADIDGLFCPICMDAWTNNGEHHICCLPCGHIYGMSCIKRWLQQRKNSGKCPQCNRKCALRDVRKLYASRVLAADEESQKKIRSLEAKCAILESKGSDWCKKESVWQKNEAELHLEVKKLTEKNAYLERLIQDMESRQIGSMNATGNCQWRSESKHSFGAKVHGKGPYCNFELQKVFQLDSARVFDVDASNQILLIAQRPKGIGGTHLLTKMSLISPYEMEDILLPSTISAIKDLHISPFNDGLAIYASLGRKLSVLSMESNNLVVNYDLQFPAWSCSWDLSNSHYIYAGLQNGSVLVFDMRQTAGPVKSLSGLSSNPVHTVQSLVQDSSLPSDVRTILSASAIGLCQWNIDAVEGPCIIPETNNQGVCISLAYCPSSDDIVVSYRPKFDMSIDGPLSQPSLTPFHVAGQGVQGSHVLFKRLGGNHFQKLGSSCANVSNIRLPKCVIMDIESECRLLASGDEGTCEMVLQELPSFGILQRIKSPEHVRDLKYSPTLSHGLLGCLTEKSLQLFCTKIS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2824 631 MobiDBLite consensus disorder prediction 56 74 - -
Dere01g2824 631 SUPERFAMILY RING/U-box 116 173 - -
Dere01g2824 631 Gene3D - 182 507 IPR015943 GO:0005515
Dere01g2824 631 MobiDBLite consensus disorder prediction 27 49 - -
Dere01g2824 631 SUPERFAMILY WD40 repeat-like 339 500 IPR036322 GO:0005515
Dere01g2824 631 Coils Coil 231 251 - -
Dere01g2824 631 ProSiteProfiles Zinc finger RING-type profile. 123 169 IPR001841 -
Dere01g2824 631 SMART ring_2 123 168 IPR001841 -
Dere01g2824 631 CDD mRING-C3HGC3_RFWD3 119 181 - -
Dere01g2824 631 MobiDBLite consensus disorder prediction 1 109 - -
Dere01g2824 631 Pfam Ring finger domain 123 169 IPR001841 -
Dere01g2824 631 PANTHER RFWD3 PROTEIN 31 629 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Dere01g2824 631 Coils Coil 189 209 - -
Dere01g2824 631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 181 IPR013083 -
Dere01g2824 631 MobiDBLite consensus disorder prediction 80 94 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2824 01 43091972 43099477 Dere01g2824 01 43091972 43099477 ECH