Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2778 ATGAAGCTTCTGGACAAGAACTTCGCGCTGAACCAGCCGGGGACGGTAAAGATCGTTCCTGAAGAACCAGACGACTTATGGGTGGTTTACAACCTCATTGCCCCCGGAGACGTCATCACCGCCGATACGACCCGCAAAGTCCACCTGGAGGCCACCAAGAAGACCGCCTCGCGCGTCAAACTCACCCTCCCCGTCAAAGTCATGTACCACGGCTTCCACAAAGACTCCTCCACCGTGCGCGTCCAAGGCAGGAACATAGAGGCTAATCAGTACGTCGCTGCAGGTTCATTCCACACCTTGACCCTCGAAAGGAACAAATGCTTCGAACTCTCCAAAAAGATTTGGGGTTCGGCCGCTGTGGGTTCATTAACCGAAACCTCCGAGAAATCCTCAGGAGCTGACCTCGCCGTGGTTCTTCTGCAAGAGGGACAAGCAGAAGTTTACATGGTGGGGAAAGGGTTAACCACGCTTTGCTCCAAAATCGAAGCTTCACAAACCCGAAGGAAATCAACCAGCAACGTGTTTTTCCAAGACGTTTTTAGTGCCTTTGTGAAGCATGTAGATTTCAGCACCATTAAAAGCGCTGTGATAGCGAGTACTGGCTCGACGAAAGATGAGTTTCGGAGGTTTCTGCTCTCGGAGGCAAAGAGATTGAAGATGAAGATAATTGAGGACAATAAGTCGCGAATTGTCGTCGCGGGATGTAAGGGTGATTTGAAGGCTGTTCTGAATGACAATGGGGTGATGAACATGATAAAAGATAGCAAGGTCGTGTTGGAGATTAGAGCTTTCAGAGAGTTGTGGGACTTGATAGAGAGCAAATCTGGTCGTGCATGTTATGGTCCAAAAAATGTGGAGGCTGCGCAGGAGATGATGGCGATTGAGACGCTTCTGATCACGGATGATCTATACAGGAGCGCAGATGTTAAGACGAGGCAAAAGTATGCGAATCTGGTTAAGTCAGTGAAAGAGGGAGGAGGGAAGGCTTTGGTATATTCCTCAATGCATGTCTCAGCAGAACAGCTTAACCAACTCACGGGTGTAGCTGCAATTCTGAGGTTTCCGTTGCCTGATCCTGATGACGTGGATGCTTAA 1095 0.4941 MKLLDKNFALNQPGTVKIVPEEPDDLWVVYNLIAPGDVITADTTRKVHLEATKKTASRVKLTLPVKVMYHGFHKDSSTVRVQGRNIEANQYVAAGSFHTLTLERNKCFELSKKIWGSAAVGSLTETSEKSSGADLAVVLLQEGQAEVYMVGKGLTTLCSKIEASQTRRKSTSNVFFQDVFSAFVKHVDFSTIKSAVIASTGSTKDEFRRFLLSEAKRLKMKIIEDNKSRIVVAGCKGDLKAVLNDNGVMNMIKDSKVVLEIRAFRELWDLIESKSGRACYGPKNVEAAQEMMAIETLLITDDLYRSADVKTRQKYANLVKSVKEGGGKALVYSSMHVSAEQLNQLTGVAAILRFPLPDPDDVDA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2778 364 Pfam eRF1 domain 1 1 125 IPR005140 -
Dere01g2778 364 NCBIfam mRNA surveillance protein pelota 11 356 IPR004405 GO:0070481|GO:0070966|GO:0071025
Dere01g2778 364 SUPERFAMILY Translational machinery components 131 256 - -
Dere01g2778 364 Gene3D - 254 364 IPR029064 -
Dere01g2778 364 SUPERFAMILY L30e-like 250 356 IPR029064 -
Dere01g2778 364 SMART eRF1_1_2 1 128 IPR005140 -
Dere01g2778 364 FunFam Protein pelota homolog 1 129 - -
Dere01g2778 364 Pfam eRF1 domain 3 260 356 IPR005142 -
Dere01g2778 364 Gene3D eRF1 domain 2 133 252 IPR042226 -
Dere01g2778 364 Gene3D Pelota, domain A 1 129 IPR038069 -
Dere01g2778 364 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Dere01g2778 364 FunFam Protein pelota homolog 256 364 - -
Dere01g2778 364 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 126 IPR038069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2778 Dere-ChrDere01 42642685 42643779 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2778 01 42642685 42643779 Dere01g2778 01 42642685 42643779 ECH