Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2708 ATGGGTGAATGTGGGTCACTAAAGTTCCTTCTCCTCCTTCACCTCCTATGCTTCCTGCAACTCCCTCACCCCCTGCAGTCACAAGGCAATGAGTTTTCTCGTCAGCTTCCTCGTCAAGTAATCTTAACTTCTAATGACCGCTCCGACTCCGAGCCTCAGCAGGTACACATCTCGCTGGCGGGGATGGACCACATGAGAGTGTCGTGGATCACAGAAGACAAGCACGTGCCATCTGTGGTGGAATACGGAACAGAGTCTGGAAAGTACAGTGCAGAGGCCACCGGAGAACAAAGACGGTACCATTACTTCTTCTACGAGTCCGGTACCATACACCACGTCAGAATTGGGCCTCTACGTCCGAGCACCACTTACTTCTACAGGTGTGGAGGCTCCGGACCCGAATTTTCCTTCAAGACTCCTCCAGCTCAATTGCCCATTGAATTTGTTGTCGTCGGAGACTTGGGACAAACTGAATGGACAAAATCAACCTTAGAACACGTAGACAGCAAAGACTACGACATGTTTTTGTTGCCGGGAGATCTGTCCTACGCCGATAGCCACCAATCACTATGGGACTCATTCGGCCGTCTGGTTGAGCCCAGCGCTAGCCGGAGGCCGTGGATGGTCACCGAAGGCAACCACGAGATCGAGTCCTTCCCAGTCATCTTGCCCGAGCCCTTTAGGGCCTACAACGCTCGTTGGCTCATGCCCTACGAGGAAAGTGGTTCCACCTCCAACCTCTACTACTCCTTCGAGGTTGCCTCTACCCACGTCATCATGTTGGGTTCCTACACAGATTTCGACACCGATTCCGACCAATACAAGTGGCTCCAGTCTGACCTGGCAACCATCGATAGGCAGAAGACCCCTTGGGTAATTGTGCTCTTGCATGCACCTTGGTATAATACCAATACGGCTCATCAAGGTGAAGGCGAAAGCATGAGACAAGCCATGGAAGAGTTGCTTTATAACGCCCGAGTTGACTTGGTTTTTGCCGGTCACGTTCATGCTTACGAACGCTTTACTCGTATTTACGACAACAAGGCTGATCCGTGTGGTCCCATGTACGTGACAATCGGGGACGGAGGGAACCGCGAGGGACTTGCGTTAACGTATAAGAACCCCAAGAGCCCCTTATCAGTGTACCGGGAGCCAAGTTTTGGTCATGCAAGGTTGAGAATAGTAAATGAAACGCATGCACATTGGTCGTGGCACCGAAACAATGACACTGATGCAGTTGTAGCTGACGGTGTTTGGATAAATAGTTTAAGCAGCATGAAAGCATGCTGGGAGACATCATCGGCTGCTCGTGATGAACTTTGA 1323 0.5117 MGECGSLKFLLLLHLLCFLQLPHPLQSQGNEFSRQLPRQVILTSNDRSDSEPQQVHISLAGMDHMRVSWITEDKHVPSVVEYGTESGKYSAEATGEQRRYHYFFYESGTIHHVRIGPLRPSTTYFYRCGGSGPEFSFKTPPAQLPIEFVVVGDLGQTEWTKSTLEHVDSKDYDMFLLPGDLSYADSHQSLWDSFGRLVEPSASRRPWMVTEGNHEIESFPVILPEPFRAYNARWLMPYEESGSTSNLYYSFEVASTHVIMLGSYTDFDTDSDQYKWLQSDLATIDRQKTPWVIVLLHAPWYNTNTAHQGEGESMRQAMEELLYNARVDLVFAGHVHAYERFTRIYDNKADPCGPMYVTIGDGGNREGLALTYKNPKSPLSVYREPSFGHARLRIVNETHAHWSWHRNNDTDAVVADGVWINSLSSMKACWETSSAARDEL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2708 440 Gene3D - 51 142 - -
Dere01g2708 440 SUPERFAMILY Metallo-dependent phosphatases 146 410 IPR029052 -
Dere01g2708 440 Pfam Calcineurin-like phosphoesterase 148 338 IPR004843 GO:0016787
Dere01g2708 440 Pfam Purple acid Phosphatase, N-terminal domain 52 139 IPR015914 GO:0003993|GO:0046872
Dere01g2708 440 Gene3D - 143 429 IPR029052 -
Dere01g2708 440 SUPERFAMILY Purple acid phosphatase, N-terminal domain 40 141 IPR008963 GO:0003993|GO:0046872
Dere01g2708 440 CDD MPP_PAPs 145 422 IPR041792 -
Dere01g2708 440 Pfam Iron/zinc purple acid phosphatase-like protein C 353 412 IPR025733 -
Dere01g2708 440 PANTHER ACID PHOSPHATASE RELATED 14 424 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2708 Dere-ChrDere01 41849999 41852985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2708 50 412 Miscellaneous Gene Families AT2G03450 26.364 2.30e-28 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2708 01 41849999 41852985 Dere01g2708 01 41849999 41852985 ECH