Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2676 ATGAATCTTCTAAAGTGTCTCACTCTTTCTCTGTTACTTTGCCTCCTCTTTGTGATAATTAATAACAATGCAGTCGAAGCGTCTCATCATATATATCCTCGTCTTCAATCCATTTCAGCCACCACGGTGAATCAGCTTCACAGAACTGGATACCACTTTCAACCTCCTAGGCACTGGATCAACGGACCCATGTACTATAAAGGATACTACCATCTGTTCTACCAGTTCAACCCCAAAGGAGCAGTGTGGGGGAACATTGTGTGGGCCCACTCGGTATCGAAGGACCTTATCAATTGGAAAGCGCTTGAACCGGCCCTTTACCCCTCCAAACCATTTGACAAGTACGGGTGTTGGTCCGGTTCAGCCACCGTCGTCCCGGGTAAAGGACCAGTAATCCTCTACACTGGAGTTGTTGATGAAAACCAAACACAGGTCCAATGCTACGCAGTACCCAAAGATGTATCCGACCCGTTTCTTAGGAAATGGGTAAAGCCTGATTCCATCAACCCTATATTGGTCGCAGACCACGCCGTCAACGGCAGCGCATTCCGTGACCCGACAACGGCGTGGTGGAGCAAGGTGGACCGGCACTGGAGGATTCTGGTGGGTAGCAGAAGGAAGAACAGAGGAATAGCCCATTTGTACAGAAGTAGGGACTTTGTGAAGTGGGTCCGGGCCAAACACCCGATCCATTCTTCAGCAATCACGGGTATGTGGGAATGCCCCGACTTCTACCCGGTTTCCTTGAGAGGGAAACATGGGCTGGACACGTCGGTGGTTGGGGAAAACATTAAGCACGTGTTGAAGAATAGCCTTGACATGACCAGGTTTGAGTACTACACGATTGGAAAGTATATCCAGGAGAAGGATAGGTATATCCCGGATAACGCTATGCAGGATAGTTGGGGTGGCCTCAGATATGATTACGGCAACTTTTATGCTTCCAAGTCATTCTTTGATCCCAGAAAGAAACGAAGGGTCTTGTGGGGTTGGGCAAACGAGTCTGATTCTGGGGCCGATGATGTTAAAAAAGGATGGGCCGGAATCCAGGCAATCCCAAGAACAGTGTGGCTTGATTCAAATGGGAAACAATTGGTTCAATGGCCCGTCGAAGAGTTGAATACTCTAAGACGGGAAGAAGTTCAGATGAGGAATAAAAGACTTCACAAGGGATGCTACGATGAAGTGAAAGGAATTACAGCTGCCCAGGCTGACGTGGAAGTGACCTTCTCATTTTCAAGCTTGAACAAAGCAGAGCCATTTAATCCTAAGTGGGTGAACGCACAGGATATTTGTGCCCAGAAGGGGTCAAAAGTTCGAGGTGGGGTTGGACCATTTGGGCTTCTCACGTTGGCTTCTGAAAAACTGGAAGAGTTCACTCCTGTGTTTTTCAGAATTTTCAAGTCTCGAAACAGGCATGTGGTTCTCCTGTGCTCTGATGCATCAAGCTCCTCTTTGAAGAGTCACTTGTACAAGCCATCCTTTGCTGGCTTTGTGGACGTGGATTTAGCCGACAAGAAGCTTTCTCTGAGGAGTTTGATTGATCACTCTGTGGTAGAAAGTTTTGGGGAAGGAGGGAAAACAAATATCTTATCAAGGGTTTATCCAACGTTAGCAGTAAGGAGTGCAGCTCGCTTGTTTGTGTTCAACAACGGTACTGAGCCAATCACTGTGGAGAATCTCAAGGCATGGAGCATGAAATCTGTTCGTATAAACTAA 1719 0.4735 MNLLKCLTLSLLLCLLFVIINNNAVEASHHIYPRLQSISATTVNQLHRTGYHFQPPRHWINGPMYYKGYYHLFYQFNPKGAVWGNIVWAHSVSKDLINWKALEPALYPSKPFDKYGCWSGSATVVPGKGPVILYTGVVDENQTQVQCYAVPKDVSDPFLRKWVKPDSINPILVADHAVNGSAFRDPTTAWWSKVDRHWRILVGSRRKNRGIAHLYRSRDFVKWVRAKHPIHSSAITGMWECPDFYPVSLRGKHGLDTSVVGENIKHVLKNSLDMTRFEYYTIGKYIQEKDRYIPDNAMQDSWGGLRYDYGNFYASKSFFDPRKKRRVLWGWANESDSGADDVKKGWAGIQAIPRTVWLDSNGKQLVQWPVEELNTLRREEVQMRNKRLHKGCYDEVKGITAAQADVEVTFSFSSLNKAEPFNPKWVNAQDICAQKGSKVRGGVGPFGLLTLASEKLEEFTPVFFRIFKSRNRHVVLLCSDASSSSLKSHLYKPSFAGFVDVDLADKKLSLRSLIDHSVVESFGEGGKTNILSRVYPTLAVRSAARLFVFNNGTEPITVENLKAWSMKSVRIN 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2676 572 Gene3D Glycosyl hydrolase domain; family 43 57 382 IPR023296 -
Dere01g2676 572 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 381 566 - -
Dere01g2676 572 Gene3D - 383 566 - -
Dere01g2676 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 369 569 IPR013320 -
Dere01g2676 572 SMART glyco_32 52 526 IPR001362 GO:0004553|GO:0005975
Dere01g2676 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 369 IPR013148 -
Dere01g2676 572 CDD GH32_Fruct1-like 58 358 - -
Dere01g2676 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 17 569 - -
Dere01g2676 572 Pfam Glycosyl hydrolases family 32 C terminal 372 565 IPR013189 -
Dere01g2676 572 SUPERFAMILY Arabinanase/levansucrase/invertase 43 370 IPR023296 -
Dere01g2676 572 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 56 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2676 Dere-ChrDere01 41606175 41610384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2676 21 566 Glycoside Hydrolase AT2G36190 64.884 0.0 734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2676 01 41606175 41610384 Dere01g2676 01 41606175 41610384 ECH