Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2665 ATGCAAAGCCACGTTGAGATAAAACCAGGCGTCCACACTTATGTTGCTCAGTGGCCAATCTATGCTCTAGCATGGTCGTTACGTCGTGACAAAAATCCCCGGCTTGCCGTAGGTAGTTACATAGAGGACCACATGAACAAGGTTGAACTGGTTCACTTCAACTATGAGACATTAAATTTCAGAACTGACCCTAATCTGGTGTTTGATCACCCTTATGCACCAACAAACATCATGTTCTTCCCTTCCGAGGACAACACGAACCCCGACATCATCGCCACCGCTGGAGACTACCTAAGACTGTGGGAAATTCACGATGATCGGATTGAGCTCAAGTCCCTCCTCAACGGCAATAAAGTCAGAGATAACTCAGCCATAACCTCCTTTGATTGGGCTGAGTTTGATACCCATCGCGTGGCTACTTCAAGCGTGGACACTACATGTACCATATGGGACATAGAGAGGGAAACTTTGGACACACAATTAGTGGCACATGACAAAGAAGTTTACGACATATCATGGGGTGGATTCAATGTATTTGCTTCTGTGTCTGGGGATGGTTCTGTAAGGGTTTTTGATTTGAGGGACAAAGAAAAATCGACCATAATATTCGAAAACCCAGTCCAAGATTGCCCTCTGCTACGCTTGGAATGGAATAAAGGCGATCCAAGGTTCATGGCTACGGTCGGAATGGACAGTAATAAAGTGGTAATAATGGATATCAGGCTACCAACCACTCCTCTGATGGAATTAAACAAGCATAAGGGAAGTGTTAATGCTATATCATGGTCCCCCTATATCGGACGGCAGCTATGCTCTTGCGGTGATGATTCCAGGGCTTTGATTTGGGAGGTGGTGGGAACAGGGTTTCAACCAAGGAATGGTGGAGATGAAGTCAAGCCAGAGATGTGGTATGAATCAACGGCTGAGATTAATCAAGTGCGTTGGTCTCCTATTCAGATGGACTGGATTGCCCTTGCTTTCCTGAATACGTTACAGCTTTTGAAGGTGTAG 1011 0.456 MQSHVEIKPGVHTYVAQWPIYALAWSLRRDKNPRLAVGSYIEDHMNKVELVHFNYETLNFRTDPNLVFDHPYAPTNIMFFPSEDNTNPDIIATAGDYLRLWEIHDDRIELKSLLNGNKVRDNSAITSFDWAEFDTHRVATSSVDTTCTIWDIERETLDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIFENPVQDCPLLRLEWNKGDPRFMATVGMDSNKVVIMDIRLPTTPLMELNKHKGSVNAISWSPYIGRQLCSCGDDSRALIWEVVGTGFQPRNGGDEVKPEMWYESTAEINQVRWSPIQMDWIALAFLNTLQLLKV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2665 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 161 201 IPR001680 GO:0005515
Dere01g2665 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 284 IPR001680 GO:0005515
Dere01g2665 336 ProSitePatterns Trp-Asp (WD) repeats signature. 270 284 IPR019775 -
Dere01g2665 336 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 284 - -
Dere01g2665 336 SMART WD40_4 198 239 IPR001680 GO:0005515
Dere01g2665 336 SMART WD40_4 107 151 IPR001680 GO:0005515
Dere01g2665 336 SMART WD40_4 243 283 IPR001680 GO:0005515
Dere01g2665 336 SMART WD40_4 154 192 IPR001680 GO:0005515
Dere01g2665 336 Pfam WD domain, G-beta repeat 161 192 IPR001680 GO:0005515
Dere01g2665 336 SUPERFAMILY WD40 repeat-like 19 284 IPR036322 GO:0005515
Dere01g2665 336 PANTHER WD REPEAT CONTAINING PROTEIN 6 336 IPR045159 -
Dere01g2665 336 Gene3D - 10 333 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2665 Dere-ChrDere01 41502570 41503580 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2665 01 41502570 41503580 Dere01g2665 01 41502570 41503580 ECH