Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2660 ATGTCCCAGACGAAGAAATTGACGCCGAATCTTGATCAGCAGAGCACGAAGATGCTCAATCTCACGGTTCTCCAGAGGAGAGATCCGTTCATCGAAGAGATCCTGTTTACTGCCGCTCATGTGTCCTTCTACGAGTTCAACATCGATAGCAATCAATGGAGTCGTAAGGATGTTGAAGGATCTCTCTTTGTCGTGAAGAGGAATGCAGAACCTCAGTTTCAATTCATAGTAATGAACCGACGCAATGCAGATAACCTAGTGGAGAATCTATTAGATTTTGAGTATGAACTTAAGAAGCCATACTTATTATATCGGAATGCTGCCCAAGAAGTTAATGGTATATGGTTTTACAATTCAGATGAAAGTGAAGAAGTTGCAAATCTCTTTAATAGGATACTTGATGCTTACCCAAAGGCACCTTCAAAGGCAAAAGTGTCTTCTAGCAAAAGTGAATTTGAGGAACTTGAACCCGTATCAATTATTACAGAAAGGCCTCTAAAGTCATCCTCAGCCACCCCTTCTGCAATGGATGCTCTCGAAGATCCTGCATTTATAGACTCTCTCAGTATAGATAAGATCACTGGAAATTATACTTCAAATGTGGAAAGTTTAAAACAGCCCTGCTTTTCTGGAAGTGTCACTTCTGTTGCTTCCAGTGGTGTATTTTCACTGGCACCCACTATGACAATACCAGCAGCTTCTCATTCAGCTTCATCCCTCCCAGCCTTCCTACATGACTCTTCTGATACCAACAACAGGGCCAATCAAGTTGCTAATCTTTTGAAGCCTTCTACATTTTTAGCACCCTCTTCTTCATCTTCGCTGTTAGCTCCACCTATCTCTTCCTCTGCACCTTCTTCAGCTTTTCATAATTTCCTGAATCAGCCACAGCCACGTCTATATGGCACTCCGATGCTTCAACCATTTCCACCACCCAGCCCACCTCCATCTCTTAACCCAATTTCTACCTCCTCTCCCAGTATGCCTATTATCAGAAGAGAGAAAGTACGTGATGCACTTTTATCACTGGCTCAGGATGATCAATTCATTGACATCGTGTTTCAAGCATTGCTGAGGCTGCACCCTTGA 1089 0.4279 MSQTKKLTPNLDQQSTKMLNLTVLQRRDPFIEEILFTAAHVSFYEFNIDSNQWSRKDVEGSLFVVKRNAEPQFQFIVMNRRNADNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNSDESEEVANLFNRILDAYPKAPSKAKVSSSKSEFEELEPVSIITERPLKSSSATPSAMDALEDPAFIDSLSIDKITGNYTSNVESLKQPCFSGSVTSVASSGVFSLAPTMTIPAASHSASSLPAFLHDSSDTNNRANQVANLLKPSTFLAPSSSSSLLAPPISSSAPSSAFHNFLNQPQPRLYGTPMLQPFPPPSPPPSLNPISTSSPSMPIIRREKVRDALLSLAQDDQFIDIVFQALLRLHP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2660 362 MobiDBLite consensus disorder prediction 307 326 - -
Dere01g2660 362 SUPERFAMILY PH domain-like 19 138 - -
Dere01g2660 362 Gene3D - 7 135 IPR011993 -
Dere01g2660 362 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 359 IPR010334 GO:0000290|GO:0008047|GO:0043085
Dere01g2660 362 MobiDBLite consensus disorder prediction 307 322 - -
Dere01g2660 362 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Dere01g2660 362 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Dere01g2660 362 CDD EVH1-like_Dcp1 19 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2660 Dere-ChrDere01 41450643 41456750 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2660 01 41450643 41456750 Dere01g2660 01 41450643 41456750 ECH