Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2649 ATGGCCTCCACTTCATCTCTCTCTGCATTTACACAAAGGCTAACAGGCAAGGTGGCAGTGATAACCGGAGGAGCTAGCGGCATCGGCAAATGTACGGCACAAGTGTTCGCACGGCATGGAGCTAAAGTGGTAATCGCGGACATCCAAGATGAACTGGGCCATTCTGGGGCCCAATCCATAGGCCCATCCAATTGCACGTACGTGCATTGCGATGTGACCGACGAGGCCCAAGTGAAAAACGCGGTGGACACAGCGGTGAAAAAGTACGGAAAACTAGACATCATGATGAACAACGCAGGCATAAGCGATCCATTCAAGCCCAAAATAGGGGAAAACGAGATTGCGGACTTCGAGCGGGTGCTGAAGGTAAATGTGACAGGTGTGTTTCTCGGCATCAAGCACGCGTCGCAGGCCATGACGGGAGGAGGTGGCGGGAGCATTATATCGACGGCGAGCACGGCGTCGAAGATGGGCGGTTCAACCACACATGCGTATTGTTGCGCGAAGCATGCGGTGGTTGGGCTCACTAGAAGTGCAGCAGTGGAGATGGGGCAGTTCGGGATAAGGGTGAATTGCTTGTCGCCGTACCTTCTTGCCACCCCTATGGCTACCAAGTTTTACGGGCAAAGCGAGGAGGAGGTGGAGGAAGCCGCAAAGTCGGTGGCTAATCTGAAAGGTGCGACCCTCAAGGCAAGCGATGTGGCTAATGCTGCACTTTTTCTTGCTAGTGACGACTCCGGGTACATGAGCGGCCACAACCTGCTCATTGATGGGGGCTTCTCTGTTTCTGCTGCTTCGGTTTATAACATGTTTCAGTACCCAACCTCATCCTGA 834 0.5372 MASTSSLSAFTQRLTGKVAVITGGASGIGKCTAQVFARHGAKVVIADIQDELGHSGAQSIGPSNCTYVHCDVTDEAQVKNAVDTAVKKYGKLDIMMNNAGISDPFKPKIGENEIADFERVLKVNVTGVFLGIKHASQAMTGGGGGSIISTASTASKMGGSTTHAYCCAKHAVVGLTRSAAVEMGQFGIRVNCLSPYLLATPMATKFYGQSEEEVEEAAKSVANLKGATLKASDVANAALFLASDDSGYMSGHNLLIDGGFSVSAASVYNMFQYPTSS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2649 277 Pfam Enoyl-(Acyl carrier protein) reductase 23 261 - -
Dere01g2649 277 Gene3D - 3 273 - -
Dere01g2649 277 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Dere01g2649 277 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 11 264 - -
Dere01g2649 277 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 152 180 IPR020904 GO:0016491
Dere01g2649 277 FunFam Short-chain dehydrogenase reductase 3 266 - -
Dere01g2649 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 IPR002347 -
Dere01g2649 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Dere01g2649 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 139 155 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 186 203 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Dere01g2649 277 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2649 Dere-ChrDere01 41320946 41321966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2649 10 260 Miscellaneous Gene Families AT4G05530 31.395 2.75e-26 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2649 01 41320946 41321966 Dere01g2649 01 41320946 41321966 ECH