Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2646 ATGACGCTTGGCTCAGGAGGATCGAGTGTCGTGGTACCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGAGGTGAAAAGGGTATTGGAGATGGCACAGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGTCCCCATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTCTGCGATAAAGATTATCCTGACAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAATTTGGTGTTCTTGCAAATTGGCAACGAGAGTACACTATGGAGGATATACTGACCCAGCTGAAAAAGGAAATGGCTGCTCCACATAACCGGAAGCTTGTCCAGCCTCCAGAAGGTACCTACTTTTAG 441 0.4422 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPDKPPSVRFHSRINMTCVNHETGVVEPKKFGVLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2646 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
Dere01g2646 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Dere01g2646 146 SMART ubc_7 16 144 - -
Dere01g2646 146 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 4 146 - -
Dere01g2646 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 46 134 - -
Dere01g2646 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Dere01g2646 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2646 Dere-ChrDere01 41285582 41288243 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2646 01 41285582 41288243 Dere01g2646 01 41285582 41288243 ECH