Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2635 ATGGCTTCCACACACATTCTCTCTCTATTCTGTATCTTTTCTGCCATCGTCTTCGCTTCATTTGCATCACCCGACACCATTACTCTTTCTATCTCACCTTTATCCGCCAAACACCCATCTTCCGATCCCTCTCAGGCCCTCAAAGTCATTGCCTCTGCTTCTTTAACCAGAGCCCATCACCTCAAGCACCGCAAATCCGATTCCAATCCTTCCCTCGTCAAAACACCAGAATACCCCAAAAGCTACGGAGGATACTCTGTTGATCTCAATTTCGGAACCCCGCCTCAAACCTTCCCTTTCGTTTTGGACACCGGAAGTAGCCTCGTCTGGTTCCCCTGCTCCTCTCGTTATCTCTGTTCCAAATGTTCCTTCCCAAACATCGACACCGCCCAAATCCCCAAGTTTATCCCTAAGAATTCATCCTCCGCCAAGTTCATCGGTTGCAAAAACCCAAAATGTGGATGGATTTCGGGCACTGATTCTCAATTTCGATGCCAAGACTGTAAACCCGATGCCCAGAATTGCTCCCAGCTTTGTCCTGCTTATATAATTCAGTATGGCTTGGGCTCCACCGCTGGCTTCTTACTCTCGGAAAGCCTCGACCTTCCTGGGAAAATCGTACCTGATTTTGTCGTCGGGTGCTCTATCATGTCCATCCGTCAACCCGCCGGGATCGCTGGGTTCGGTCGCGGGCCTGAATCGCTGCCCTCGCAGCTGGATCTCAAGAGATTCTCTTACTGTTTGATCTCTCACCGGTTTGACAACTCCACCGAAAGCAGTGACCTCATTTTGCAGAGTGGATCCTCCGACGACACCAAAACCGATGGCCTTAGCTACACTCCGTTTCTGAAAAACCCAGCCGTGAACAATTCAGCCTTCCGCGAGTACTATTACCTAACTATTCGAAAAATCATCGTCGGCGGCCAGCGAGTCAAGATTCCATCCAAGTTTTTTGAGCCAGATTTAGACGGTAATGGGGGTACCATAGTGGACTCTGGCTCCACCTTCACATTCATGGAAAGGCCCATTTTCGAATTGGTGGCACAAGAATTCGAGAAACAGATGGCTAACTATACCAGAGCCAAGGACATTGAAACCCAATCCGGATTGAGCCCCTGTTTCGATATTTCGGCCCAGAAATCGGTTTCGTTCCCAGAATTCACTTTCCGATTCAGAGGGGGTGCCAAGATGACTTTGCCTTTACAGAACTATTTTTCGTTGGTGGGCAAATCGCACGTCGCGTGCTTGACGATTCTCTCCGACAACAATGGGGGTCCAGCGATGGCCGGCGGGCCGGCGATAATTTTAGGAAACTATCAGCAGCAGAATTTCTATGTGGAATATGACTTGGAAAATGAGCGGTTCGGATTTCGGCCTCAAAGTTGCAAGAAGAGTACTTAG 1401 0.4918 MASTHILSLFCIFSAIVFASFASPDTITLSISPLSAKHPSSDPSQALKVIASASLTRAHHLKHRKSDSNPSLVKTPEYPKSYGGYSVDLNFGTPPQTFPFVLDTGSSLVWFPCSSRYLCSKCSFPNIDTAQIPKFIPKNSSSAKFIGCKNPKCGWISGTDSQFRCQDCKPDAQNCSQLCPAYIIQYGLGSTAGFLLSESLDLPGKIVPDFVVGCSIMSIRQPAGIAGFGRGPESLPSQLDLKRFSYCLISHRFDNSTESSDLILQSGSSDDTKTDGLSYTPFLKNPAVNNSAFREYYYLTIRKIIVGGQRVKIPSKFFEPDLDGNGGTIVDSGSTFTFMERPIFELVAQEFEKQMANYTRAKDIETQSGLSPCFDISAQKSVSFPEFTFRFRGGAKMTLPLQNYFSLVGKSHVACLTILSDNNGGPAMAGGPAIILGNYQQQNFYVEYDLENERFGFRPQSCKKST 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2635 466 FunFam Aspartyl protease family protein 268 465 - -
Dere01g2635 466 Pfam Xylanase inhibitor N-terminal 85 263 IPR032861 -
Dere01g2635 466 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Dere01g2635 466 PRINTS Pepsin (A1) aspartic protease family signature 328 339 IPR001461 GO:0004190|GO:0006508
Dere01g2635 466 PRINTS Pepsin (A1) aspartic protease family signature 434 449 IPR001461 GO:0004190|GO:0006508
Dere01g2635 466 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Dere01g2635 466 CDD pepsin_A_like_plant 84 462 IPR034161 -
Dere01g2635 466 Gene3D Acid Proteases 68 261 IPR021109 -
Dere01g2635 466 Gene3D Acid Proteases 265 466 IPR021109 -
Dere01g2635 466 FunFam Aspartic proteinase nepenthesin-2 58 262 - -
Dere01g2635 466 Pfam Xylanase inhibitor C-terminal 297 458 IPR032799 -
Dere01g2635 466 SUPERFAMILY Acid proteases 81 462 IPR021109 -
Dere01g2635 466 PANTHER OS07G0603500 PROTEIN-RELATED 32 463 - -
Dere01g2635 466 ProSiteProfiles Peptidase family A1 domain profile. 85 458 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2635 Dere-ChrDere01 41190437 41191837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2635 83 464 Miscellaneous Gene Families AT1G44130 23.096 2.23e-12 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2635 01 41190437 41191837 Dere01g2635 01 41190437 41191837 ECH