Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2617 ATGGCCGCCCAGAGTCAACCTTCCTCCTCTTCCAACGCGTTTTCCTTCATCTCCAAGGGTTGGCGGGAGGTTCGAGACTCTGCTGATGCCGATTTCCGATTGATGCGAGACCGAGCCAACTCCTTCAAGAACCTTGCTACCTCTTTTGACCGCGAGCTGGAGAACTTCTTCAATTCGGCTTCCCCGTTCGGCGTTCCGGCCATTCGGTCTCCTCCGCAGGCCGAGATTGATTTTGTAAAGAAGTTTCAGCCCAAGCTGTCTGAAATTCGACGAGCCTATTCGTCGCCTGATTTCAGTAAGAAGGTTCTCGAGAAGTGGCGGCCCAGGTCAAGGATTCGGATCGACTTATCGGCGATAAAGAATGCAATTGTATCCGAGGTTGAGGATGCTGATGAAATTCTCGATTTTGATAGGGGCAAGAGAGCTAGGAGATTGAACTTTAGGGAGTTCTGGGGGGAATGGAAAGCAGATGGTGAAGTGGATGGGGAAGGCCAGTCCACTCGGGATTGGGAGCCAATTCGAGCTTTGAAGACAAGGTTGAAAGAGTTTGAAAAACGGAGCTCATCCGTAGAGATTTTTGATGGATTCAAGAATGGTGAATTTGTGGAGAAATTAAAAACAAGCTTGAAATCAATGCGCATGGAGCCTCAAGAGTCAAAGGGAGTGCCACCATTGGATGTGCCTGAACTTTTGGCGTATTTTGTTAGGCAATCTGTGCCATTTTTGGATCAACTTGGAGTCAAAAGAGAGATATGTGACAAGATAGTGGAAAGCTTGTATAACAAACGCAAAAGCCAACTTTTTCTGCAGTCTCTGTCTGGGGAAGAATCTTCTGTTCTTGGGAAGGGGAACATCAACGATGAATTGGATTTGCGAATAGCAACTGTCCTCCAGAGCACAGGGCACCGATATGATGGTGGGCTGTGGACAGACCATGCAAAGCATGATCTGTCAGGCACTGAAAGACATGTTGCAATAGTTACAACAGCTAGTCTTCCTTGGATGACAGGAACAGCGGTGAATCCACTATTTCGAGCTGCATATCTATCACAATCTGCAAAGCAAAAAGTCACTCTTCTGGTTCCATGGCTTTGTAAATCAGATCAAGAACTAGTTTATCCTGGCAATCTCACCTTTAGTTCACCAGAAGAGCAGGAAATTTATATACGTAATTGGCTTGAGGAAAGAATTGGTTTTAAGGCAGACTTTAAAGTTTCCTTTTATCCTGGGAAGTTTTCAAAAGCAAGACGAAGTATTATACCTGCTGGAGATACTTCTCAGTTTATCCCATCCAAGGAAGCTGACATTGCAATACTGGAAGAACCAGAACATCTGAATTGGTACCATCATGGGAAGCGTTGGACAGACAAATTCAACCATGTTGTTGGTATTGTCCACACAAATTACTTAGAATATATTAAGAGGGAGAAAAATGGGGCCCTCCAAGCATTCCTTGTGAAACACATAAACAACTGGGTGACGAGAGCATATTGCCACAAGGTCCTTCGTCTTTCAGCTGCAACTCAGGATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCCAAGTTCTTGAAAATTGGAGAGAAGGTTGCTGCCGAGAGGGAGCTTGGGCAGAAAGCCTTTACAAAAGGGGCATATTTCTTGGGCAAGATGGTATGGGCAAAGGGATATAAGGAATTGATAGATTTATTAGCAAAGCATAAGAGCGACCTTGGTGGCTTCAAGTTGGACGTGTTTGGAAATGGAGAAGATGCTCATGAAGTTCAGAGTGCAGCTAGGAGGTTGGATTTAAATCTCAACTTTCAAAAAGGAAGAGACCATGCAGATGATTCTCTTCATGGGTACAAGGTCTTTATAAATCCTAGTATTAGTGACGTGCTATGCACAGCTACAGCTGAGGCCCTTGCCATGGGAAAATTTGTAGTTTGTGCTGATCATCCGTCAAATGAGTTCTTTATGTCATTCCCCAACTGTTTGACTTACAAGACATCTGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAATGAACCTCATCCCCTTACTCCTGAGCAAAGATATCAACTTTCGTGGGAAGCTGCTACTCAAAGATTTATGGACTATTCTGAGCTTGACAAAGTCTTGAACAATAAAAAGGATGGTGCAAAATCAGGTACATACAATAGAAAGCTCGCTGTAAGGTCAGCGTCAATGCCTAGTCTGACGGAACTTGTCGATGGAGGCTTGGCATTTGCTCATTATTGTCTCACTGGTAATGAATTCCTGAGACTCTGTACTGGAGCAATACCTGGGACACGTGACTATGATAAGCAGCACTGTGTAGACCTTCATCTCTTGCCTCCCCAGGTAGAAAAACCTATCTATGGCTGGTAA 2385 0.4419 MAAQSQPSSSSNAFSFISKGWREVRDSADADFRLMRDRANSFKNLATSFDRELENFFNSASPFGVPAIRSPPQAEIDFVKKFQPKLSEIRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKNAIVSEVEDADEILDFDRGKRARRLNFREFWGEWKADGEVDGEGQSTRDWEPIRALKTRLKEFEKRSSSVEIFDGFKNGEFVEKLKTSLKSMRMEPQESKGVPPLDVPELLAYFVRQSVPFLDQLGVKREICDKIVESLYNKRKSQLFLQSLSGEESSVLGKGNINDELDLRIATVLQSTGHRYDGGLWTDHAKHDLSGTERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPGNLTFSSPEEQEIYIRNWLEERIGFKADFKVSFYPGKFSKARRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKSDLGGFKLDVFGNGEDAHEVQSAARRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFMSFPNCLTYKTSEDFVAKVKEALENEPHPLTPEQRYQLSWEAATQRFMDYSELDKVLNNKKDGAKSGTYNRKLAVRSASMPSLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCVDLHLLPPQVEKPIYGW 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2617 794 CDD Glycosyltransferase_GTB-type 453 655 - -
Dere01g2617 794 Pfam Glycosyl transferases group 1 549 684 IPR001296 GO:0016757
Dere01g2617 794 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 522 680 - -
Dere01g2617 794 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 792 IPR044525 GO:0046481
Dere01g2617 794 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 411 521 - -
Dere01g2617 794 Gene3D Glycogen Phosphorylase B; 546 699 - -
Dere01g2617 794 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 324 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2617 Dere-ChrDere01 40976080 40981458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g2617 12 616 Glycosyltransferase AT3G11670 70.915 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2617 01 40976080 40981458 Dere01g2617 01 40976080 40981458 ECH