Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2591 ATGCGACTTTTGTCTATAGTCTGTACTGATACGTTTGGTATCCCGCAATATAATATAAGATTAAGCAATGACACTCTCCCAAGTCTTCTCTTCTCTTTCCCCTTTCCTATTCCCATCATCCATTCTCAACCATTAAGCAAAGGTCCTTCCTTCTCACCAGACGAGGTACCCACTTCACTTTTCCTCTCTCCCTTCAATAATTCAACCATACGACCCTGCTTCCACTCTAATTTCGCTGCCAAAATCTGTGCTTTCTCCTCCATGGGCACCATGGATTCTTTCCTCTATGGTGTCTCCTCCTCTAAGCCCTTCTTCCCCTACTTCACTGCCCTTCTCTTGCTTTCCATTCTGCCGTTCCACTCCGCATTGCCCCAAAACCCCGCCCAGAAATTCTCTTCTTCAAGCTCCGGTCAGATTAACTCTAACTCCATTCTCGTGGCTCTTCTCGATTCCCATTATACTGAGTTAGCTGAGCTTGTAGAGAAAGCGCTTCTCTTACAGAAACTCGAGGATACCGTGGGGGTGCACAATATTACCATTTTCGCCCCCCGGAATGAAGCTCTGGAGCGTCAGCTCGACCCCGAGTTTAAGCGATTCCTGCTTGAACCCGGGAATCTGAGGTCGTTACAGACCCTTCTGATGTATCACATTGTCCCTAAACGAATAGGGTCGCATGACTGGCCCAATGGGAATTCTGGAGCCGTTCCGCACCAGACCTTATGCAACGACCATGTGCATTTGACGAGCAAGGGTCCTGGGAACATGGTAGTTGGTTTAGCCGAGATTGTTCGCCCCGACGACGTCGTTCGACCCGACGGTGTGATTCACGGGATTGAGCGGCTGTTGATTCCACGATCAGTGCAGGAGGATTTCAATCGCAGGCGGAATTTGCAGGACATCTCAGCGGTGCTTCCAGAGGGTGCGCCAGAGGTGGATCCCAGAACCCACCGGTTGAAGAAACCAGCCCCAGTTCCCGCCGGGGCACCGCCTGTATTGCCCATTTACGACGCGATGGCACCTGGTCCTTCACTGGCTCCCGCACCGGCGCCGGGACCTGGTGGTCCTCACCATCACTTCAATGGTATGCGCCAGGTCAAGGACTTCATCCATACTCTGTTACATTACGGTGGGTACAATGAAATGGCAGATATTCTGGTCAACTTAACATCTTTAGCCACCGAAATGGGAAGGTTAGTCTCAGAGGGTTACGTCCTGACGGTTTTGGCTCCCAATGACGAGGCCATGGCCAAGCTAACCACAGACCAATTGAGTGAACCAGGTGCACCGGAGCAAATAATATACTACCATATCATACCGGAGTATCAGACGGAGGAGAGTATGTACAATGCCGTGAGGAGGTTTGGGAAAGTTCGATACGATACACTGCGGTTGCCGCATAAGGTTGTGGCTCAGGAGGCCGATGGGTCTGTGAAGTTTGGGCAAGGTGAAGGTTCTGCTTATCTGTTCGATCCTGATATATATACAGATGGGAGAATTTCGGTGCAGGGTATTGATGGGGTTCTTTTCCCGCCGGAAGAGGAGCCAAAGACAGAGCGAGTAACAACCCCACTTGTCAAAGTTGCCACCAAACAAAGGAGAGGGAAATTGCTGGAAGTAGCCTGTAGCATGCTTGGAGCTTTTGGACGAGTCTGCTAA 1656 0.5066 MRLLSIVCTDTFGIPQYNIRLSNDTLPSLLFSFPFPIPIIHSQPLSKGPSFSPDEVPTSLFLSPFNNSTIRPCFHSNFAAKICAFSSMGTMDSFLYGVSSSKPFFPYFTALLLLSILPFHSALPQNPAQKFSSSSSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDTVGVHNITIFAPRNEALERQLDPEFKRFLLEPGNLRSLQTLLMYHIVPKRIGSHDWPNGNSGAVPHQTLCNDHVHLTSKGPGNMVVGLAEIVRPDDVVRPDGVIHGIERLLIPRSVQEDFNRRRNLQDISAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEPKTERVTTPLVKVATKQRRGKLLEVACSMLGAFGRVC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2591 551 ProSiteProfiles FAS1/BIgH3 domain profile. 140 282 IPR000782 -
Dere01g2591 551 SUPERFAMILY FAS1 domain 344 512 IPR036378 -
Dere01g2591 551 FunFam Fasciclin-like arabinogalactan protein 16 360 511 - -
Dere01g2591 551 Gene3D FAS1 domain 145 285 IPR036378 -
Dere01g2591 551 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 112 551 IPR044654 -
Dere01g2591 551 SMART fasc_3 406 511 IPR000782 -
Dere01g2591 551 SMART fasc_3 179 285 IPR000782 -
Dere01g2591 551 SUPERFAMILY FAS1 domain 142 285 IPR036378 -
Dere01g2591 551 Pfam Fasciclin domain 152 284 IPR000782 -
Dere01g2591 551 Pfam Fasciclin domain 400 510 IPR000782 -
Dere01g2591 551 Gene3D FAS1 domain 384 511 IPR036378 -
Dere01g2591 551 ProSiteProfiles FAS1/BIgH3 domain profile. 365 493 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2591 Dere-ChrDere01 40743563 40748334 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2591 01 40743563 40748334 Dere01g2591 01 40743563 40748334 ECH