Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2550 ATGAACTATTTAAGAAACACAAATTGTCTCGTTTCTTTGCTAAAATTGAAAGATTACGTCCTATACGAGACTCCCAAGTTCTGTCATCAATACCTCCAATGTCGAGGCATAGTGAAGGTCCGGCTCAAGTGGGTGAAAAACCGAAGTATTGATCACATAATTGACAAGGAAACGGATATGAAGGCTGCTTGCCTCCTCAAGGATGCGATTAAGCGCTCCTCCACTGGTTTTCTCACAGCAAAATCTGTAGCTGATTGGCAAAAGCTGCTTGGCCTCACAGTCCCGGTTCTTCGTTTCATGCGTAGGTACCCCACTCTCTTTGAGGAATTTCCACATCCTCGTTGGCCCAGTTTGCCTTGTTTCCGTATGACAGATACTGCAGTACTGTTGGACTCGCAAGAACAAAGCATTCACGAGATCCACGAGAGTGATACCGTGGAACGGCTCTGTAAGGTACTTATGATGATGAAAACTCGAACTGTGCCGCTGCAGTCTCTTCATCCTTTGAAATGGGATCTGGGTTTGCCGGATTGTTTTGAGAAAACACTGGTTCCAAAATACCCAGATTATTTTCAATTTGTAAAGGCCTCAAATGGGGTCACCTGCCTGCGACTACCTAAGTGGTGTGAGGAATTTGCAGTTTCGGCATTGCAAAAGAGCAACGAAAGCAGGGCATCTGGGGATGAGTACAGGCAGTTCAAGAGAGGGCAGGCAGCTCTAATTTTCCCAATGAATTTTCCTAGGGGATATGGGGCACAGAAGAAAGTGAGGGCATGGATGGAGGAATTTCAGAAGTTACCTTACATTTCTCCTTATGAGGACTCTAAACAAATTGACCCAAATAGTGAATTAATGGAGAAACGAGTGGTTGGAGTTCTGCATGAATTTTTAAGTTTAACTATGCACAAGAAAACAAAGAGGAATTACTTGAGAAGCTTGAGGGAGGAGTTGAATCTTCCACATAAGTTTACCCGAATATTCACTAGATATCCAGGCATATTTTACCTTTCATTGAAGTGTAAAACAACGACCGTTACTCTTAAAGAAGGGTATCAACGTGGAAAACTAGTAGATCCACATCCTATTGCTCGTCTCAGAGAGAAGTTTTATTATGTAATGAGGACAGGGCTCCTTCATCGTGGTAAAGGCACAAACTTTATAAATCAAGAAGACTTATTGCTAAATTGTACACTGGATGAGACAGGGCAGGGGGAATCTGGGGAGGAAGAGGTTGAAACAGGTGATGAATTCTATGAGCTTGAAGATTCAGAGCTAGATGAAGCGTCTGACAGAGAGTAG 1299 0.4311 MNYLRNTNCLVSLLKLKDYVLYETPKFCHQYLQCRGIVKVRLKWVKNRSIDHIIDKETDMKAACLLKDAIKRSSTGFLTAKSVADWQKLLGLTVPVLRFMRRYPTLFEEFPHPRWPSLPCFRMTDTAVLLDSQEQSIHEIHESDTVERLCKVLMMMKTRTVPLQSLHPLKWDLGLPDCFEKTLVPKYPDYFQFVKASNGVTCLRLPKWCEEFAVSALQKSNESRASGDEYRQFKRGQAALIFPMNFPRGYGAQKKVRAWMEEFQKLPYISPYEDSKQIDPNSELMEKRVVGVLHEFLSLTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLKEGYQRGKLVDPHPIARLREKFYYVMRTGLLHRGKGTNFINQEDLLLNCTLDETGQGESGEEEVETGDEFYELEDSELDEASDRE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2550 432 MobiDBLite consensus disorder prediction 403 432 - -
Dere01g2550 432 MobiDBLite consensus disorder prediction 400 432 - -
Dere01g2550 432 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 36 405 IPR045040 GO:0003723
Dere01g2550 432 Pfam Plant organelle RNA recognition domain 45 376 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2550 Dere-ChrDere01 40339735 40341033 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2550 01 40339735 40341033 Dere01g2550 01 40339735 40341033 ECH