Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g2529 ATGGAGGAAGAAGAAGACCGGCAGAAGCTTGCAGATCTGGTAAAGGAACTCGTACTTCGCTTACTTTCTCAAAATCAACCATCTGATTCGCAGCTTCAAAACCCTAACTCGCCCGACTTTCAAAACTCCCTTCGCTATGCAATTCGCATACTATCCAGTAGATTGACACCCTCGATTGCACGCGACTCTGCCGCCATCGCTGAGTCCATCAAGCGCCGTCTCGCCACTCAAGGTAGGTCAGCCGAAGCCCTTACTTTTGCAGACCTTTACACCAAATTCGCTTCGAGAACTGGACCTGGGTGTGTAAACAACAAATGGGCTGTTATTTATTTGCTCAAAATCATATCGGAAGACCGGAAAAACATGCAAAGTCAATTGGGCGCTTCGGTTTTGTTGCCCAATTTAGCTTTCGCCGACAACAAGTCGGCTAAGGATGCTAGGATATTTCACAGTCGTGCTGCCCAGGAGAAGGGATGGAATAATGGGGTTTTGTTGGTTACGAAGGATCCAGATAATCGTCGTGATATTGCCTTTCGGGAGTTTGTAAATTTCGTTAAAGAACAAAATGAGGTCTCTGAAGAGGTTTTGGTTAGGGATGTATTATATGCCTGTCAAGGAGTTGATGGGAAGTATGTGAAATTTGATAATAAGGTTGATGGGTTTGCCTTACCAGATTTGATTGAGGTCCCTAAAGCGACTAGGACTATGGTTCACAAGCTTTGTGAACTAGGGCGGTTGTTTAAAAAGGTTACAAGATACATATTACAGAGTGTGGATCGATTTCCTGCAGAAGATGTAGGAACTGTTGGGCAGGCGTTCTGTGCTGCATTGCAAGACGAGCTCACAGAGTACTATAAGTTGTTGGCGGTGCTTGAAGCGCAATCTTTAAATCCTATTCCATTAGTATCAGAATCAGCAAGTTCAGCAAATTATCTTTCACTGAGGAGATTAGCTGTTTGGCTAGCGGAGCCAATGGTAAAAATGAGGTTAATGGCTGATTTGGTTGATAGGTGTAGGGTTTTGAGGGGTGGAGCGATGGCTGGTGCAATTCATTTGCATGCCCAACATGGTGACCCACTAGTTCATGAATTCATGAGGAGATTGTTGCAGCGAGTGTGTTCTCCACTTTTTGAAATGGTGAGAAGATGGGTTCTGGAAGGGGAGTTAGAAGATATCTTTGCCGAATTCTTTATTGTGGGTCAGCAGGTGAAAGCTGAATCCCTTTGGAGAGAAGGTTACAGGCTCCATCCTGCCATGCTTCCTTCATTTATTTCACCTTCTCTTGCTCAGCGTATCTTAAGGACTGGGAAGTCCATAAATTTTCTGTGTGTTTGTTGTGAGGATCGCAGTTGGGCTGATGCTGCAACAGAGGCTGCAACTGCCATAGGGGCCACGACAAGAAGAGGTGGTTTTGGCTATGGTGAAACTGATGCTCTCGATTCCTTGGTTGATCAAGCAGCAAAAAGAATTGATAAGCATTTGTTGGATGTAATATACAAAAGGTACAAATTCAAAGAACACTGTCTTGCAATTAAGCGGTATTTACTGCTTGGTCAAGGTGATTTTGTTCAATATCTAATGGATATTGTTGGCCCTGAGCTTTCTGAGCCTGCTAATACTATAAGCTCTTTTAAACTTGCTGGATTACTGGAAACTGCAATTCGGTCATCCAATGCTCAATATGATGATCCTGACATATTGGATAGGCTACGGGTCAAAATGATGCCACATGAAAGTGGTGATAAGGGCTGGGATGTATTTTCACTGGATTATGATGCAAGAGTCCCACTAGATACTGTGTTCACAGAGTCTGTGATGTCAAGATATTTGAGGATTTTTAATTTTCTGTGGAAGCTTAGAAGAGTGGAACATGCACTCATTGGTGCCTGGAAGACCATGAAACCAAATTGTATTACTTCTCATTCCTTTACGAAGCTGCAACAAGCAGTTAAGTTGCAGTTAGTTTCAACATTCAGGCGTTGCCAAGTTCTTTGGGTTGAGATGAATCACTTTATTTCAAACTTGCAATATTATATAATGTTTGAAGTCTTGGAGGTATCATGGTCAAATTTTTCAAATGAGATGGATATAGCCAAGGATCTTGATGACCTACTTGCGGCACATGAGAAGTATCTACATTCCATTGTTGAGAAATCTCTGCTTGGGGAGCGTTCCCAGTCCCTTTACAAGTCACTATTAGTGGTCTTTGATCTTATATTACGGTTTCGAGGTCATGCAGATCGATTATATGAAGGCATTCATGAGTTGCAAGCAAGGATCATGGAATCCTCTCGAGATCAGAATGAATCACGGAAACAATTGAATGACAAGTCTTCGGAACATGGATCCTGGATTGCTGATGGCAGGAAAGCCCTAACACAACGTGCAAGTGAATTTCTTCAAAGTGTGGGACAAGATCTTGATGCAATCGCTAAGGAGTATTCATCATTGCAAGAGGAGTTCATCTCTCAGTTGCCTGTTCAGCAGCATGTTGATCTTAAGTTCCTCTTTTTCCGTCTTGACTTCAATGAATTTTATATGCGGTTGTATCAACCATTTGATGATGCATTAATTAACTACAGATGGTTTTTGACTCCTTTCTGGTCGTTTGCTTGGTAA 2619 0.4246 MEEEEDRQKLADLVKELVLRLLSQNQPSDSQLQNPNSPDFQNSLRYAIRILSSRLTPSIARDSAAIAESIKRRLATQGRSAEALTFADLYTKFASRTGPGCVNNKWAVIYLLKIISEDRKNMQSQLGASVLLPNLAFADNKSAKDARIFHSRAAQEKGWNNGVLLVTKDPDNRRDIAFREFVNFVKEQNEVSEEVLVRDVLYACQGVDGKYVKFDNKVDGFALPDLIEVPKATRTMVHKLCELGRLFKKVTRYILQSVDRFPAEDVGTVGQAFCAALQDELTEYYKLLAVLEAQSLNPIPLVSESASSANYLSLRRLAVWLAEPMVKMRLMADLVDRCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSPLFEMVRRWVLEGELEDIFAEFFIVGQQVKAESLWREGYRLHPAMLPSFISPSLAQRILRTGKSINFLCVCCEDRSWADAATEAATAIGATTRRGGFGYGETDALDSLVDQAAKRIDKHLLDVIYKRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLAGLLETAIRSSNAQYDDPDILDRLRVKMMPHESGDKGWDVFSLDYDARVPLDTVFTESVMSRYLRIFNFLWKLRRVEHALIGAWKTMKPNCITSHSFTKLQQAVKLQLVSTFRRCQVLWVEMNHFISNLQYYIMFEVLEVSWSNFSNEMDIAKDLDDLLAAHEKYLHSIVEKSLLGERSQSLYKSLLVVFDLILRFRGHADRLYEGIHELQARIMESSRDQNESRKQLNDKSSEHGSWIADGRKALTQRASEFLQSVGQDLDAIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYMRLYQPFDDALINYRWFLTPFWSFAW 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g2529 872 Coils Coil 800 820 - -
Dere01g2529 872 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 11 846 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Dere01g2529 872 Coils Coil 274 294 - -
Dere01g2529 872 Gene3D - 505 845 IPR042241 -
Dere01g2529 872 Pfam Gamma tubulin complex component N-terminal 197 500 IPR041470 -
Dere01g2529 872 Pfam Gamma tubulin complex component C-terminal 506 846 IPR040457 GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g2529 Dere-ChrDere01 40129472 40132486 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2529 01 40129472 40132486 Dere01g2529 01 40129472 40132486 ECH